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Os03g0676300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.025) R2 : 0.628
β1 : 1.36 (0.0917) R2dD : 0.186 R2D : 0.117
β2 : 0.967 (0.0618) R2dC : 0.201 R2C : 0.214
β3 : -1.16 (0.0923) R2dE : 0.13 R2E : 0.146
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.584 (0.0536) R2dN8 : 0.131 R2N8 : 0.0713
σ : 0.468
deviance : 101.07
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C
peak time of C : 2.67
E
wheather : humidity
threshold : 60.6
memory length : 784
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.14 0.453 12.6 1.23 1.01 -1.32 0.94 1.97 0.567 2.92 59.27 744 -- --
98.88 0.463 12.6 1.37 1.02 -1.27 0.907 -- 0.587 3.03 59.97 740 -- --
95.83 0.456 12.6 1.23 1.15 -1.3 -- 2.05 0.564 2.9 57.04 645 -- --
101.07 0.468 12.6 1.36 0.967 -1.16 -- -- 0.584 2.67 60.6 784 -- --
127.43 0.526 12.6 1.26 -- -1.75 -- 1.81 0.475 -- 65.67 1012 -- --
119.09 0.512 12.6 1.4 1.12 -- 0.293 -- 0.637 0.776 -- -- -- --
119.44 0.512 12.6 1.39 1.12 -- -- -- 0.636 0.741 -- -- -- --
132.19 0.535 12.6 1.42 -- -1.71 -- -- 0.475 -- 68.7 1010 -- --
148.76 0.568 12.6 -- 0.833 -1.21 -- -- 0.427 2.01 54.35 961 -- --
197.57 0.657 12.6 1.43 -- -- -- -- 0.656 -- -- -- -- --
170.3 0.61 12.6 -- 1.14 -- -- -- 0.481 0.798 -- -- -- --
182.09 0.628 12.6 -- -- -1.75 -- -- 0.424 -- 57.01 1032 -- --
251.46 0.74 12.6 -- -- -- -- -- 0.498 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.46 humidity 70 720 > th dose dependent rect. 11 17
6 89.66 humidity 90 720 > th dose dependent rect. 10 14
12 89.81 humidity 90 720 > th dose dependent sin 19 NA
17 89.89 temperature 30 1440 < th dose dependent rect. 15 1
23 90.07 humidity 90 720 > th dose dependent rect. 14 9
25 90.14 temperature 30 1440 < th dose dependent rect. 13 3
41 90.37 temperature 30 1440 < th dose dependent rect. 13 1
67 90.77 humidity 60 720 > th dose dependent sin 15 NA
85 91.00 temperature 25 1440 > th dose independent rect. 13 5
88 91.02 temperature 25 1440 < th dose independent rect. 11 7
170 91.81 temperature 25 1440 > th dose independent rect. 13 1
191 91.93 humidity 50 14400 > th dose independent rect. 11 1
205 92.09 temperature 25 1440 < th dose independent rect. 13 1
220 92.23 temperature 15 1440 > th dose dependent rect. 15 1
246 92.37 temperature 25 1440 < th dose independent rect. 11 18
249 92.39 humidity 50 14400 < th dose independent rect. 10 2
254 92.43 humidity 80 1440 < th dose independent rect. 11 2
269 92.55 temperature 10 1440 > th dose dependent rect. 13 4
289 92.63 humidity 80 1440 < th dose independent rect. 10 7
298 92.66 humidity 80 1440 > th dose independent rect. 10 7
300 92.67 humidity 80 1440 > th dose independent rect. 11 2
317 92.72 humidity 90 720 < th dose dependent rect. 10 20
357 92.85 humidity 80 1440 < th dose independent rect. 10 5
369 92.90 temperature 25 1440 > th dose independent rect. 15 1
377 92.92 radiation 1 4320 < th dose independent rect. 12 1
379 92.92 radiation 1 4320 < th dose dependent rect. 12 1
400 92.99 temperature 25 1440 > th dose independent rect. 12 17
415 93.05 humidity 50 14400 > th dose independent rect. 18 18
417 93.05 humidity 60 720 > th dose dependent rect. 22 23
418 93.06 radiation 1 4320 > th dose independent rect. 12 1
426 93.08 humidity 80 1440 > th dose independent rect. 10 5
429 93.09 temperature 25 1440 < th dose independent rect. 15 1
431 93.09 humidity 70 1440 > th dose dependent rect. 11 2
447 93.15 temperature 25 1440 > th dose independent rect. 12 14
448 93.15 humidity 90 720 > th dose independent rect. 10 15
464 93.20 humidity 50 720 > th dose dependent rect. 20 23
474 93.25 humidity 60 720 > th dose dependent no NA NA
483 93.27 humidity 60 720 > th dose dependent rect. 14 23
502 93.34 humidity 50 14400 < th dose dependent rect. 16 20
505 93.36 humidity 50 14400 < th dose independent rect. 8 4
554 93.46 humidity 80 1440 > th dose independent rect. 10 11
562 93.50 humidity 90 720 < th dose dependent sin 16 NA
569 93.52 radiation 1 4320 > th dose independent rect. 12 5
577 93.54 radiation 1 4320 < th dose independent rect. 12 5
587 93.56 humidity 50 14400 > th dose independent rect. 16 20
611 93.62 humidity 50 14400 < th dose independent rect. 16 20
619 93.63 humidity 50 14400 < th dose dependent rect. 13 23
621 93.65 humidity 50 14400 > th dose independent rect. 5 7
624 93.66 humidity 50 14400 > th dose independent rect. 7 5
625 93.66 humidity 50 14400 < th dose dependent sin 10 NA
648 93.70 humidity 50 14400 > th dose independent rect. 22 14
689 93.80 humidity 90 720 > th dose independent sin 18 NA
755 93.92 humidity 50 14400 < th dose dependent rect. 13 2
786 93.97 humidity 50 14400 > th dose independent sin 10 NA
796 94.00 humidity 90 720 < th dose independent rect. 10 16
800 94.02 humidity 90 720 > th dose independent rect. 15 10
808 94.04 temperature 25 1440 < th dose independent sin 19 NA
811 94.04 humidity 50 14400 < th dose dependent rect. 13 4
820 94.06 humidity 50 14400 < th dose dependent rect. 10 1
841 94.12 humidity 50 14400 < th dose independent sin 8 NA
878 94.20 radiation 1 4320 < th dose dependent rect. 12 5
879 94.20 humidity 70 1440 > th dose dependent rect. 10 7
912 94.27 humidity 50 14400 > th dose independent sin 8 NA
924 94.30 humidity 60 720 > th dose dependent rect. 1 23
925 94.31 humidity 80 720 < th dose independent rect. 10 22
942 94.34 humidity 80 1440 < th dose independent rect. 10 20
948 94.36 humidity 50 14400 < th dose independent sin 10 NA