Os03g0676100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF589 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0676100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF589 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.74 | 0.363 | 8.6 | 0.791 | 0.651 | -0.485 | -0.915 | 0.424 | -0.386 | 19.7 | 93 | 285 | -- | -- |
| 60.2 | 0.361 | 8.61 | 0.807 | 0.648 | -0.465 | -1.06 | -- | -0.378 | 19.6 | 92.66 | 292 | -- | -- |
| 61.64 | 0.366 | 8.6 | 0.791 | 0.68 | -0.449 | -- | 0.758 | -0.38 | 19.3 | 92.01 | 307 | -- | -- |
| 63.24 | 0.37 | 8.6 | 0.826 | 0.677 | -0.399 | -- | -- | -0.364 | 19.4 | 92.42 | 282 | -- | -- |
| 80.2 | 0.417 | 8.58 | 0.826 | -- | -0.617 | -- | 0.818 | -0.325 | -- | 90.15 | 391 | -- | -- |
| 66.71 | 0.383 | 8.59 | 0.76 | 0.855 | -- | -0.749 | -- | -0.273 | 19 | -- | -- | -- | -- |
| 68.12 | 0.387 | 8.59 | 0.775 | 0.855 | -- | -- | -- | -0.274 | 18.9 | -- | -- | -- | -- |
| 79.8 | 0.416 | 8.6 | 0.886 | -- | -0.782 | -- | -- | -0.423 | -- | 91.98 | 388 | -- | -- |
| 80.96 | 0.419 | 8.62 | -- | 0.707 | -0.311 | -- | -- | -0.435 | 19.4 | 92.52 | 283 | -- | -- |
| 106.47 | 0.482 | 8.57 | 0.757 | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
| 83.96 | 0.429 | 8.61 | -- | 0.847 | -- | -- | -- | -0.361 | 18.9 | -- | -- | -- | -- |
| 100.27 | 0.466 | 8.62 | -- | -- | -0.666 | -- | -- | -0.501 | -- | 91.51 | 349 | -- | -- |
| 121.58 | 0.515 | 8.59 | -- | -- | -- | -- | -- | -0.375 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.70 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 12 |
| 5 | 59.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 11 | 59.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 13 | 59.50 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 16 | 59.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 18 | 59.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 20 | 59.63 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 24 | 59.64 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 12 |
| 36 | 59.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 38 | 59.72 | humidity | 90.0 | 270 | > th | dose independent | sin | 5 | NA |
| 41 | 59.73 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 10 |
| 42 | 59.73 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 57 | 59.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 14 |
| 67 | 59.88 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 80 | 59.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 82 | 59.98 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 94 | 59.99 | wind | 5.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 95 | 60.02 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 96 | 60.02 | humidity | 90.0 | 10 | < th | dose independent | rect. | 21 | 10 |
| 105 | 60.06 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 8 |
| 109 | 60.06 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 110 | 60.06 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 112 | 60.08 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 118 | 60.11 | humidity | 90.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 139 | 60.18 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 155 | 60.21 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 165 | 60.23 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 176 | 60.26 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 191 | 60.29 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 196 | 60.30 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 212 | 60.33 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 220 | 60.34 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 230 | 60.36 | wind | 7.0 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 240 | 60.40 | temperature | 25.0 | 270 | < th | dose independent | sin | 5 | NA |
| 248 | 60.41 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 251 | 60.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 271 | 60.44 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 273 | 60.44 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 275 | 60.44 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 288 | 60.45 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 291 | 60.45 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 297 | 60.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 298 | 60.46 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 300 | 60.46 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 303 | 60.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 310 | 60.48 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 318 | 60.49 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 323 | 60.50 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 328 | 60.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 345 | 60.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 364 | 60.51 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 372 | 60.51 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 379 | 60.52 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 12 | 6 |
| 397 | 60.52 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 412 | 60.53 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 466 | 60.54 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 15 | 22 |
| 469 | 60.55 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 472 | 60.55 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 475 | 60.55 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 476 | 60.55 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 477 | 60.55 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 500 | 60.56 | wind | 5.0 | 270 | < th | dose independent | sin | 20 | NA |
| 502 | 60.56 | radiation | 10.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 548 | 60.56 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 15 | 19 |
| 551 | 60.56 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 586 | 60.57 | radiation | 30.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 616 | 60.58 | humidity | 50.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 617 | 60.58 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 618 | 60.58 | radiation | 10.0 | 43200 | < th | dose dependent | no | NA | NA |
| 619 | 60.58 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 698 | 60.58 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 732 | 60.59 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 767 | 60.60 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 775 | 60.60 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 809 | 60.61 | wind | 7.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 830 | 60.61 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 947 | 60.63 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 949 | 60.63 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 955 | 60.63 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 993 | 60.64 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 4 | 11 |