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Os03g0674600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Growth-regulating factor 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.49 (0.0256) R2 : 0.422
β1 : -0.876 (0.0937) R2dD : 0.131 R2D : 0.156
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.29 (0.0895) R2dE : 0.255 R2E : 0.26
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.167 (0.0547) R2dN8 : 0.0176 R2N8 : 0.0212
σ : 0.478
deviance : 105.36
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 0.1572
memory length : 89
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 8.49
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.79 0.457 7.49 -0.945 0.42 -1.43 -0.477 -0.445 0.177 12.2 0.73 95 8.75 --
94.95 0.454 7.49 -0.926 0.42 -1.46 -0.526 -- 0.181 12.4 0.73 94 8.73 --
95.67 0.456 7.49 -0.963 0.421 -1.39 -- -0.629 0.176 11.9 0.7206 93 8.77 --
96.17 0.457 7.49 -0.947 0.416 -1.42 -- -- 0.175 11.8 0.73 89 8.67 --
105.53 0.478 7.49 -1.01 -- -1.27 -- -0.826 0.163 -- 0.6606 89 8.45 --
129.63 0.534 7.49 -1.03 0.637 -- 0.255 -- 0.104 7.11 -- -- -- --
129.79 0.533 7.49 -1.02 0.637 -- -- -- 0.104 7.2 -- -- -- --
105.36 0.478 7.49 -0.876 -- -1.29 -- -- 0.167 -- 0.1572 89 8.49 --
117.81 0.506 7.5 -- 0.456 -1.51 -- -- 0.228 12.3 0.1505 66 8.54 --
151.22 0.575 7.51 -1.01 -- -- -- -- 0.115 -- -- -- -- --
157.35 0.587 7.47 -- 0.626 -- -- -- 0.218 7.31 -- -- -- --
128.02 0.527 7.48 -- -- -1.32 -- -- 0.242 -- 0.15 78 8.3 --
178.19 0.623 7.48 -- -- -- -- -- 0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.15 radiation 1.0 270 > th dose independent rect. 10 20
2 92.47 temperature 20.0 90 > th dose independent rect. 19 17
5 93.43 precipitation 0.1 270 < th dose independent rect. 11 19
6 93.43 precipitation 0.1 270 < th dose dependent rect. 11 19
7 93.90 wind 9.0 270 < th dose independent rect. 11 19
8 94.15 precipitation 0.1 270 < th dose independent rect. 10 21
9 94.15 precipitation 0.1 270 < th dose dependent rect. 10 21
10 94.27 humidity 50.0 270 > th dose independent rect. 6 5
11 94.33 precipitation 0.1 270 < th dose independent rect. 6 5
12 94.33 precipitation 0.1 270 < th dose dependent rect. 6 5
13 94.35 temperature 10.0 270 > th dose independent rect. 6 5
14 94.35 atmosphere 995.0 270 > th dose independent rect. 6 5
15 94.35 atmosphere 1015.0 270 < th dose independent rect. 6 5
16 94.35 temperature 10.0 270 > th dose independent rect. 11 19
18 94.44 wind 9.0 270 < th dose independent rect. 6 5
24 94.54 radiation 1.0 270 > th dose independent rect. 11 7
25 94.57 temperature 10.0 270 > th dose dependent rect. 11 6
26 94.64 wind 9.0 270 < th dose independent rect. 10 21
40 95.07 temperature 15.0 270 > th dose independent rect. 7 3
42 95.12 humidity 50.0 270 > th dose independent rect. 7 3
43 95.13 temperature 20.0 270 > th dose independent rect. 17 8
44 95.15 wind 9.0 270 < th dose independent rect. 7 3
45 95.16 precipitation 0.1 270 < th dose independent rect. 7 3
46 95.16 precipitation 0.1 270 < th dose dependent rect. 7 3
48 95.18 atmosphere 995.0 270 > th dose independent rect. 7 3
49 95.18 atmosphere 1015.0 270 < th dose independent rect. 7 3
50 95.18 temperature 10.0 270 > th dose independent rect. 10 21
51 95.27 radiation 1.0 90 > th dose independent sin 15 NA
54 95.34 radiation 1.0 90 < th dose dependent sin 15 NA
55 95.38 radiation 1.0 270 > th dose independent rect. 6 5
56 95.41 wind 7.0 270 < th dose independent rect. 11 7
73 95.74 radiation 1.0 270 > th dose independent rect. 7 3
76 95.78 radiation 1.0 90 < th dose independent sin 15 NA
77 95.79 temperature 30.0 270 < th dose dependent rect. 23 7
79 95.87 wind 1.0 270 > th dose independent rect. 11 7
83 95.95 radiation 40.0 270 < th dose dependent rect. 15 11
85 96.03 temperature 30.0 270 < th dose independent rect. 6 5
87 96.11 humidity 50.0 270 > th dose independent rect. 17 18
91 96.21 wind 1.0 270 > th dose independent rect. 11 19
94 96.31 temperature 10.0 270 > th dose independent rect. 11 7
95 96.31 atmosphere 1015.0 270 < th dose independent rect. 11 7
96 96.31 temperature 10.0 270 > th dose independent rect. 18 17
99 96.34 precipitation 0.1 270 < th dose independent rect. 11 7
100 96.34 precipitation 0.1 270 < th dose dependent rect. 11 7
101 96.39 wind 9.0 270 < th dose independent rect. 18 17
102 96.41 atmosphere 1015.0 270 < th dose independent rect. 18 17
103 96.44 humidity 90.0 270 < th dose independent rect. 11 6
104 96.48 temperature 30.0 270 < th dose independent rect. 7 3
114 96.71 radiation 20.0 270 < th dose independent rect. 16 10
115 96.73 atmosphere 995.0 270 > th dose independent rect. 18 17
148 97.14 temperature 10.0 270 > th dose dependent rect. 17 8
160 97.26 wind 9.0 270 < th dose dependent rect. 7 3
198 97.72 atmosphere 1015.0 270 < th dose independent rect. 7 15
218 97.85 wind 7.0 270 < th dose independent rect. 1 15
220 97.88 precipitation 0.1 270 < th dose independent rect. 2 15
221 97.88 precipitation 0.1 270 < th dose dependent rect. 2 15
227 97.91 wind 1.0 270 > th dose independent rect. 7 3
229 97.96 radiation 40.0 270 < th dose independent rect. 6 5
231 97.99 atmosphere 995.0 270 > th dose independent rect. 11 19
236 98.05 temperature 30.0 270 < th dose independent rect. 6 19
253 98.26 precipitation 0.1 270 < th dose independent rect. 22 9
254 98.26 precipitation 0.1 270 < th dose independent rect. 18 17
255 98.26 precipitation 0.1 270 < th dose dependent rect. 22 9
256 98.26 precipitation 0.1 270 < th dose dependent rect. 18 17
259 98.28 temperature 30.0 270 < th dose independent rect. 17 18
260 98.29 wind 1.0 270 > th dose independent rect. 6 5
261 98.29 wind 7.0 270 < th dose independent rect. 22 9
265 98.31 humidity 50.0 270 > th dose independent rect. 16 10
273 98.37 temperature 30.0 270 < th dose independent rect. 6 17
317 98.57 radiation 20.0 270 < th dose independent rect. 22 9
322 98.60 radiation 40.0 270 < th dose independent rect. 7 3
324 98.60 humidity 90.0 270 < th dose dependent rect. 11 6
329 98.67 humidity 50.0 270 > th dose dependent rect. 7 3
331 98.67 radiation 40.0 270 < th dose dependent rect. 22 9
333 98.70 humidity 70.0 270 > th dose independent rect. 22 9
354 98.81 wind 9.0 270 < th dose dependent rect. 6 5
366 98.87 temperature 10.0 270 > th dose independent rect. 17 9
372 98.87 temperature 10.0 270 > th dose independent rect. 2 15
373 98.87 atmosphere 1015.0 270 < th dose independent rect. 2 15
375 98.89 temperature 10.0 270 > th dose independent rect. 22 9
376 98.89 temperature 30.0 270 < th dose independent rect. 22 9
377 98.89 humidity 50.0 270 > th dose independent rect. 22 9
379 98.89 atmosphere 995.0 270 > th dose independent rect. 22 9
381 98.89 temperature 10.0 270 > th dose independent rect. 7 15
409 99.07 temperature 10.0 270 > th dose dependent rect. 18 17
428 99.12 wind 9.0 270 < th dose independent rect. 17 9
446 99.17 humidity 50.0 270 > th dose independent rect. 6 16
459 99.25 radiation 1.0 270 > th dose dependent rect. 12 18
511 99.45 radiation 1.0 270 > th dose dependent rect. 12 6
558 99.61 radiation 1.0 270 > th dose dependent sin 16 NA
561 99.66 humidity 70.0 270 < th dose independent rect. 13 3
566 99.69 atmosphere 995.0 270 > th dose independent rect. 11 7
567 99.70 atmosphere 1015.0 270 < th dose independent rect. 17 8
623 100.04 radiation 40.0 270 < th dose dependent sin 16 NA
632 100.08 temperature 30.0 90 < th dose independent rect. 8 18
642 100.10 wind 1.0 270 > th dose independent rect. 23 7
646 100.10 atmosphere 995.0 270 > th dose dependent rect. 7 3
663 100.17 humidity 70.0 270 > th dose independent rect. 6 19
664 100.18 atmosphere 995.0 270 > th dose independent rect. 10 21
670 100.22 radiation 40.0 270 < th dose dependent rect. 6 20
676 100.24 wind 9.0 10 < th dose independent rect. 12 20
694 100.27 radiation 1.0 90 < th dose dependent rect. 8 19
705 100.32 temperature 20.0 90 > th dose independent rect. 8 18
709 100.34 atmosphere 995.0 270 > th dose independent rect. 17 9
713 100.37 radiation 1.0 90 < th dose dependent rect. 12 15
719 100.40 humidity 50.0 270 > th dose dependent rect. 6 5
737 100.48 wind 9.0 270 < th dose independent rect. 7 15
738 100.49 radiation 1.0 10 > th dose independent rect. 8 4
769 100.52 radiation 1.0 270 > th dose dependent rect. 13 3
782 100.55 precipitation 0.1 10 < th dose independent rect. 12 20
783 100.55 precipitation 0.1 10 < th dose dependent rect. 12 20
784 100.56 temperature 10.0 10 > th dose independent rect. 8 4
786 100.56 atmosphere 995.0 10 > th dose independent rect. 8 4
787 100.56 atmosphere 1015.0 10 < th dose independent rect. 8 4
788 100.56 precipitation 0.1 10 < th dose independent rect. 8 4
789 100.56 temperature 10.0 10 > th dose independent rect. 12 20
790 100.56 precipitation 0.1 10 < th dose dependent rect. 8 4
799 100.60 precipitation 0.1 270 < th dose independent rect. 17 9
803 100.60 precipitation 0.1 270 < th dose dependent rect. 17 9
843 100.71 wind 9.0 10 < th dose independent rect. 8 4
849 100.71 temperature 30.0 270 < th dose dependent rect. 1 4
882 100.76 radiation 1.0 90 < th dose independent rect. 8 19
903 100.82 radiation 40.0 270 < th dose independent rect. 18 17
909 100.85 wind 9.0 10 < th dose independent rect. 14 18
911 100.86 radiation 1.0 90 < th dose independent rect. 12 15
932 100.90 precipitation 0.1 270 < th dose independent rect. 7 15
935 100.90 precipitation 0.1 270 < th dose dependent rect. 7 15
975 101.03 precipitation 0.1 10 < th dose independent rect. 14 18
979 101.03 precipitation 0.1 10 < th dose dependent rect. 14 18
980 101.04 temperature 10.0 10 > th dose independent rect. 8 6
982 101.04 atmosphere 995.0 10 > th dose independent rect. 8 6
983 101.04 atmosphere 1015.0 10 < th dose independent rect. 8 6
984 101.04 precipitation 0.1 10 < th dose independent rect. 8 6
985 101.04 temperature 10.0 10 > th dose independent rect. 14 18
988 101.04 precipitation 0.1 10 < th dose dependent rect. 8 6
993 101.07 atmosphere 995.0 90 > th dose independent rect. 8 15
996 101.09 wind 7.0 270 < th dose independent rect. 13 3
1000 101.09 radiation 40.0 90 < th dose independent rect. 13 18