Os03g0673800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF221 domain containing protein.
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Os03g0673800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF221 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.28 | 0.459 | 8.23 | -1.15 | 1.19 | -0.719 | -0.387 | 3.98 | -0.144 | 8.56 | 19.2 | 3927 | -- | -- |
| 108.35 | 0.485 | 8.35 | -1.8 | 1.21 | -0.87 | -0.602 | -- | -0.262 | 8.71 | 6.029 | 20652 | -- | -- |
| 95.73 | 0.456 | 8.23 | -1.14 | 1.19 | -0.724 | -- | 4.03 | -0.137 | 8.52 | 19.18 | 3889 | -- | -- |
| 109.21 | 0.487 | 8.35 | -1.87 | 1.21 | -0.856 | -- | -- | -0.263 | 8.6 | -0.4315 | 19802 | -- | -- |
| 172.97 | 0.613 | 8.24 | -0.952 | -- | -0.939 | -- | 4.51 | -0.0623 | -- | 20.37 | 3619 | -- | -- |
| 118.74 | 0.511 | 8.42 | -2.52 | 1.22 | -- | -0.522 | -- | -0.583 | 8.73 | -- | -- | -- | -- |
| 119.62 | 0.512 | 8.42 | -2.54 | 1.22 | -- | -- | -- | -0.583 | 8.67 | -- | -- | -- | -- |
| 190.48 | 0.643 | 8.37 | -1.75 | -- | -0.956 | -- | -- | -0.216 | -- | 10.9 | 20877 | -- | -- |
| 140.16 | 0.551 | 8.22 | -- | 1.2 | -1.97 | -- | -- | 0.288 | 8.56 | 4.227 | 47520 | -- | -- |
| 203.83 | 0.667 | 8.45 | -2.54 | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
| 289.83 | 0.796 | 8.35 | -- | 1.21 | -- | -- | -- | -0.3 | 8.82 | -- | -- | -- | -- |
| 219.93 | 0.691 | 8.24 | -- | -- | -1.99 | -- | -- | 0.316 | -- | 8.188 | 46855 | -- | -- |
| 373.78 | 0.902 | 8.39 | -- | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.40 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 11 | 89.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 10 |
| 12 | 89.27 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 17 | 89.42 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 33 | 89.83 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 44 | 89.94 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 51 | 90.00 | atmosphere | 995 | 43200 | < th | dose independent | sin | 8 | NA |
| 58 | 90.18 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 10 | NA |
| 70 | 90.36 | atmosphere | 995 | 43200 | > th | dose independent | sin | 8 | NA |
| 77 | 90.45 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 78 | 90.47 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 80 | 90.51 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 85 | 90.57 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 88 | 90.66 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 104 | 90.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 115 | 90.97 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 165 | 91.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 173 | 91.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 186 | 91.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 188 | 91.44 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 219 | 91.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 252 | 91.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 294 | 91.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 309 | 92.08 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 317 | 92.11 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 324 | 92.13 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 341 | 92.13 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 342 | 92.13 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 418 | 92.41 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 431 | 92.48 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 446 | 92.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 522 | 92.84 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 525 | 92.85 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 625 | 93.25 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 657 | 93.37 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 659 | 93.38 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 751 | 93.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 894 | 94.08 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 903 | 94.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 908 | 94.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 983 | 94.33 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |