Os03g0669200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to G-protein beta subunit 1.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0669200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to G-protein beta subunit 1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.43 | 0.246 | 11.9 | 0.235 | 0.395 | 0.632 | 0.507 | -0.512 | 0.109 | 20 | 19.4 | 2017 | -- | -- |
| 27.79 | 0.246 | 11.9 | 0.289 | 0.391 | 0.737 | 0.487 | -- | 0.122 | 19.9 | 19.11 | 2097 | -- | -- |
| 28.17 | 0.247 | 11.9 | 0.232 | 0.396 | 0.655 | -- | -0.444 | 0.111 | 20 | 19.31 | 1991 | -- | -- |
| 28.45 | 0.248 | 11.9 | 0.288 | 0.394 | 0.769 | -- | -- | 0.126 | 20 | 19.16 | 1987 | -- | -- |
| 35.25 | 0.277 | 11.9 | 0.346 | -- | 0.567 | -- | -0.315 | 0.0925 | -- | 20.5 | 553 | -- | -- |
| 37.3 | 0.286 | 11.9 | 0.624 | 0.417 | -- | 0.498 | -- | 0.267 | 20.1 | -- | -- | -- | -- |
| 38.04 | 0.289 | 11.9 | 0.609 | 0.416 | -- | -- | -- | 0.268 | 20.2 | -- | -- | -- | -- |
| 35.19 | 0.276 | 11.9 | 0.405 | -- | 0.632 | -- | -- | 0.136 | -- | 20.4 | 537 | -- | -- |
| 29.87 | 0.255 | 11.9 | -- | 0.428 | 0.872 | -- | -- | 0.0624 | 19.9 | 19.3 | 2782 | -- | -- |
| 47.56 | 0.322 | 11.9 | 0.606 | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
| 47.83 | 0.323 | 11.9 | -- | 0.412 | -- | -- | -- | 0.2 | 20.3 | -- | -- | -- | -- |
| 38.77 | 0.29 | 11.9 | -- | -- | 0.733 | -- | -- | 0.0399 | -- | 20.4 | 570 | -- | -- |
| 57.24 | 0.353 | 11.9 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 2 | 26.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 5 | 27.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 6 | 27.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 11 | 27.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 21 | 27.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 29 | 27.55 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 47 | 27.58 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 82 | 27.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 107 | 27.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 168 | 27.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 177 | 27.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 188 | 27.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 252 | 27.88 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 305 | 27.96 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 23 |
| 324 | 28.00 | temperature | 20 | 270 | > th | dose independent | sin | 9 | NA |
| 421 | 28.12 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 23 |
| 463 | 28.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 477 | 28.20 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 514 | 28.24 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 519 | 28.25 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 23 |
| 532 | 28.26 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 23 |
| 534 | 28.27 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 537 | 28.27 | temperature | 20 | 270 | < th | dose independent | rect. | 8 | 23 |
| 542 | 28.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 552 | 28.29 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 23 |
| 553 | 28.30 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 560 | 28.30 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 23 |
| 563 | 28.31 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 568 | 28.31 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 21 |
| 577 | 28.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 578 | 28.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 589 | 28.34 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 12 |
| 642 | 28.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 649 | 28.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 718 | 28.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 821 | 28.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 842 | 28.65 | temperature | 20 | 4320 | > th | dose independent | sin | 18 | NA |
| 853 | 28.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 17 |
| 862 | 28.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 863 | 28.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 15 |
| 866 | 28.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 879 | 28.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 962 | 28.73 | humidity | 90 | 14400 | > th | dose dependent | sin | 3 | NA |