Os03g0668500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0668500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.89 | 0.527 | 10.6 | -1.12 | 1.19 | 1.67 | -0.397 | -1.19 | -0.242 | 4.11 | 15.42 | 602 | -- | -- |
| 126.95 | 0.525 | 10.6 | -0.907 | 1.21 | 1.64 | -0.276 | -- | -0.185 | 4.05 | 15.19 | 584 | -- | -- |
| 126.13 | 0.523 | 10.6 | -1.09 | 1.23 | 1.66 | -- | -1.09 | -0.242 | 3.99 | 15.73 | 557 | -- | -- |
| 127.14 | 0.525 | 10.6 | -0.901 | 1.22 | 1.66 | -- | -- | -0.182 | 4.01 | 15.16 | 572 | -- | -- |
| 167.02 | 0.602 | 10.6 | -1.17 | -- | 1.71 | -- | -0.917 | -0.266 | -- | 10.42 | 1139 | -- | -- |
| 161.32 | 0.595 | 10.5 | -0.5 | 0.984 | -- | -0.0751 | -- | 0.075 | 2.69 | -- | -- | -- | -- |
| 161.34 | 0.595 | 10.5 | -0.498 | 0.983 | -- | -- | -- | 0.0755 | 2.68 | -- | -- | -- | -- |
| 168.73 | 0.605 | 10.6 | -0.976 | -- | 1.71 | -- | -- | -0.214 | -- | 14.8 | 1121 | -- | -- |
| 145.91 | 0.563 | 10.5 | -- | 1.21 | 1.24 | -- | -- | -0.0352 | 3.64 | 16.16 | 510 | -- | -- |
| 217.7 | 0.689 | 10.5 | -0.456 | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
| 167.87 | 0.606 | 10.5 | -- | 0.973 | -- | -- | -- | 0.131 | 2.67 | -- | -- | -- | -- |
| 189.95 | 0.642 | 10.5 | -- | -- | 1.2 | -- | -- | -0.0365 | -- | 16.6 | 1110 | -- | -- |
| 223.18 | 0.697 | 10.5 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 15 | 117.92 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 23 | 118.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 28 | 118.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 16 |
| 51 | 119.48 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 55 | 119.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 100 | 120.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 103 | 120.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 111 | 120.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 125 | 121.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 155 | 121.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 209 | 122.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 246 | 123.06 | humidity | 90 | 14400 | > th | dose dependent | sin | 15 | NA |
| 275 | 123.34 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 276 | 123.34 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 303 | 123.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 306 | 123.68 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 322 | 123.73 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 379 | 124.12 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 382 | 124.17 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 385 | 124.18 | wind | 9 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 395 | 124.22 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 421 | 124.34 | wind | 7 | 43200 | > th | dose dependent | rect. | 6 | 9 |
| 429 | 124.38 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 430 | 124.39 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 443 | 124.44 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 452 | 124.48 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 454 | 124.49 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 455 | 124.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 461 | 124.50 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 494 | 124.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 495 | 124.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 508 | 124.66 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 528 | 124.72 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 542 | 124.74 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 13 |
| 545 | 124.75 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 551 | 124.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 597 | 124.99 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 628 | 125.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 635 | 125.11 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 648 | 125.15 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 649 | 125.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 22 |
| 654 | 125.17 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 664 | 125.21 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 668 | 125.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 679 | 125.23 | wind | 7 | 43200 | > th | dose dependent | sin | 2 | NA |
| 691 | 125.25 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 694 | 125.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 724 | 125.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 762 | 125.36 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 815 | 125.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 858 | 125.54 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 866 | 125.56 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 872 | 125.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 892 | 125.62 | wind | 9 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 903 | 125.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 911 | 125.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 941 | 125.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 947 | 125.75 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 970 | 125.78 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 979 | 125.81 | wind | 9 | 43200 | < th | dose independent | sin | 3 | NA |
| 988 | 125.83 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 998 | 125.85 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 10 |