Os03g0667700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0667700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.52 | 0.35 | 7.39 | -0.0938 | 0.235 | 0.782 | -0.315 | -0.0826 | -0.186 | 3.04 | 25.1 | 89 | -- | -- |
| 55.53 | 0.347 | 7.39 | -0.104 | 0.234 | 0.789 | -0.342 | -- | -0.188 | 3.01 | 25.1 | 88 | -- | -- |
| 55.77 | 0.348 | 7.39 | -0.0548 | 0.236 | 0.768 | -- | -0.261 | -0.177 | 2.78 | 25.1 | 96 | -- | -- |
| 55.91 | 0.348 | 7.39 | -0.0963 | 0.233 | 0.792 | -- | -- | -0.187 | 2.75 | 25.06 | 97 | -- | -- |
| 58.26 | 0.356 | 7.38 | -0.0244 | -- | 0.907 | -- | -0.233 | -0.132 | -- | 25.83 | 70 | -- | -- |
| 64.47 | 0.376 | 7.43 | -0.298 | 0.378 | -- | -0.31 | -- | -0.345 | 2.63 | -- | -- | -- | -- |
| 64.8 | 0.377 | 7.43 | -0.29 | 0.376 | -- | -- | -- | -0.343 | 2.53 | -- | -- | -- | -- |
| 58.35 | 0.356 | 7.38 | -0.0565 | -- | 0.92 | -- | -- | -0.14 | -- | 25.83 | 59 | -- | -- |
| 56.14 | 0.349 | 7.39 | -- | 0.225 | 0.828 | -- | -- | -0.17 | 2.73 | 25.1 | 104 | -- | -- |
| 73.13 | 0.4 | 7.43 | -0.274 | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
| 67.02 | 0.383 | 7.42 | -- | 0.371 | -- | -- | -- | -0.311 | 2.51 | -- | -- | -- | -- |
| 58.44 | 0.356 | 7.38 | -- | -- | 0.937 | -- | -- | -0.131 | -- | 25.82 | 59 | -- | -- |
| 75.11 | 0.405 | 7.42 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.40 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 52.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 3 | 53.54 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 53.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 5 | 53.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 6 | 53.66 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 7 | 53.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 8 | 53.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 9 | 53.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 12 | 53.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 15 | 53.91 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 19 | 53.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 21 | 53.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 22 | 53.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 23 | 53.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 25 | 54.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 26 | 54.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 57 | 54.56 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 61 | 54.61 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 74 | 54.71 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 76 | 54.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 92 | 54.94 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 97 | 54.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 98 | 55.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 109 | 55.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 123 | 55.14 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 126 | 55.16 | temperature | 25.0 | 720 | > th | dose independent | sin | 14 | NA |
| 127 | 55.16 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 19 |
| 130 | 55.17 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 20 |
| 166 | 55.30 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 13 |
| 169 | 55.31 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 170 | 55.32 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 175 | 55.34 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 204 | 55.43 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 206 | 55.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 212 | 55.44 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 233 | 55.47 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 241 | 55.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 250 | 55.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 258 | 55.52 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 268 | 55.53 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 274 | 55.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 287 | 55.58 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 291 | 55.59 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 293 | 55.60 | temperature | 25.0 | 720 | < th | dose independent | sin | 16 | NA |
| 303 | 55.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 320 | 55.66 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 323 | 55.66 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 326 | 55.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 328 | 55.67 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 338 | 55.69 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 356 | 55.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 358 | 55.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 359 | 55.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 367 | 55.78 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 380 | 55.81 | wind | 7.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 392 | 55.82 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 428 | 55.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 431 | 55.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 446 | 55.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 449 | 55.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 461 | 55.98 | humidity | 70.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 470 | 55.99 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 13 |
| 475 | 56.01 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 520 | 56.08 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 527 | 56.09 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 535 | 56.09 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 541 | 56.10 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 569 | 56.12 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 617 | 56.21 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 624 | 56.22 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 628 | 56.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 632 | 56.23 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 662 | 56.30 | temperature | 25.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 748 | 56.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 796 | 56.43 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 805 | 56.43 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 814 | 56.44 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 15 |
| 820 | 56.45 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 841 | 56.48 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 864 | 56.51 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 888 | 56.54 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 908 | 56.57 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 916 | 56.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 955 | 56.62 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 965 | 56.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 986 | 56.65 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 11 |