Os03g0666800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0666800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 279.49 | 0.785 | 6.84 | -1.41 | 1.89 | -2.88 | -0.427 | -0.603 | 0.215 | 19.5 | 43.59 | 5643 | -- | -- |
| 279.84 | 0.779 | 6.86 | -1.51 | 1.88 | -2.82 | -0.485 | -- | 0.196 | 19.5 | 35.28 | 5657 | -- | -- |
| 279.96 | 0.779 | 6.84 | -1.4 | 1.89 | -2.87 | -- | -0.574 | 0.215 | 19.5 | 75.61 | 5686 | -- | -- |
| 280.26 | 0.78 | 6.87 | -1.53 | 1.89 | -2.84 | -- | -- | 0.173 | 19.5 | 250.3 | 5697 | -- | -- |
| 452.87 | 0.991 | 6.82 | -1.47 | -- | -2.99 | -- | -0.709 | 0.107 | -- | 89.05 | 6408 | -- | -- |
| 414.84 | 0.955 | 6.73 | -0.178 | 1.86 | -- | -0.236 | -- | 0.783 | 19.7 | -- | -- | -- | -- |
| 415 | 0.954 | 6.73 | -0.172 | 1.86 | -- | -- | -- | 0.783 | 19.7 | -- | -- | -- | -- |
| 352.32 | 0.874 | 6.82 | -1.13 | -- | -4.03 | -- | -- | 0.166 | -- | 276.7 | 573 | -- | -- |
| 321.54 | 0.835 | 6.79 | -- | 1.73 | -2.19 | -- | -- | 0.472 | 19.7 | 254.6 | 1855 | -- | -- |
| 602.37 | 1.15 | 6.68 | -0.195 | -- | -- | -- | -- | 0.756 | -- | -- | -- | -- | -- |
| 415.78 | 0.954 | 6.72 | -- | 1.86 | -- | -- | -- | 0.802 | 19.7 | -- | -- | -- | -- |
| 382.78 | 0.911 | 6.78 | -- | -- | -3.63 | -- | -- | 0.342 | -- | 293.3 | 554 | -- | -- |
| 603.38 | 1.15 | 6.68 | -- | -- | -- | -- | -- | 0.778 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 278.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 8 | 278.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 13 |
| 18 | 278.78 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 23 | 278.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 27 | 278.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 30 | 278.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 64 | 279.37 | temperature | 30 | 4320 | < th | dose dependent | sin | 4 | NA |
| 65 | 279.37 | temperature | 15 | 30 | > th | dose dependent | rect. | 2 | 18 |
| 85 | 279.65 | temperature | 10 | 4320 | > th | dose dependent | sin | 4 | NA |
| 105 | 279.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 141 | 280.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 178 | 280.70 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 12 |
| 235 | 281.21 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 237 | 281.22 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 12 |
| 252 | 281.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 274 | 281.50 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 280 | 281.58 | temperature | 25 | 4320 | < th | dose independent | sin | 3 | NA |
| 299 | 281.78 | temperature | 25 | 4320 | > th | dose independent | sin | 3 | NA |
| 305 | 281.81 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 17 |
| 334 | 281.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 375 | 282.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 502 | 282.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 543 | 283.17 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 548 | 283.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 561 | 283.26 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 591 | 283.39 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 683 | 283.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 775 | 284.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 782 | 284.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 811 | 284.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 816 | 284.32 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 849 | 284.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 850 | 284.43 | temperature | 25 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 870 | 284.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 874 | 284.52 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 927 | 284.67 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 966 | 284.76 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 12 |
| 968 | 284.77 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 983 | 284.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 23 |