Os03g0665800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os03g0665800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.97 | 0.42 | 9.03 | -0.0874 | 1.39 | 1.46 | 0.248 | -1.97 | 0.00114 | 19.7 | 19.39 | 124 | -- | -- |
| 82.96 | 0.424 | 8.99 | 0.197 | 1.4 | 1.68 | 0.139 | -- | 0.0798 | 19.7 | 15.27 | 114 | -- | -- |
| 80.15 | 0.417 | 9.03 | -0.0918 | 1.38 | 1.47 | -- | -1.95 | 0.00013 | 19.7 | 19.34 | 125 | -- | -- |
| 82.91 | 0.424 | 8.99 | 0.213 | 1.35 | 1.65 | -- | -- | 0.0981 | 19.6 | 14.8 | 177 | -- | -- |
| 139.07 | 0.549 | 9.02 | -0.417 | -- | 2.28 | -- | -4.16 | -0.0458 | -- | 24.1 | 395 | -- | -- |
| 111.12 | 0.494 | 8.94 | 0.57 | 1.67 | -- | 0.425 | -- | 0.33 | 18.7 | -- | -- | -- | -- |
| 111.58 | 0.495 | 8.94 | 0.563 | 1.68 | -- | -- | -- | 0.331 | 18.7 | -- | -- | -- | -- |
| 147.28 | 0.565 | 8.95 | 0.187 | -- | 1.95 | -- | -- | 0.0941 | -- | 24.1 | 383 | -- | -- |
| 83.97 | 0.427 | 8.99 | -- | 1.33 | 1.76 | -- | -- | 0.0642 | 19.6 | 14.7 | 177 | -- | -- |
| 258.17 | 0.751 | 8.9 | 0.524 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 119.94 | 0.512 | 8.95 | -- | 1.67 | -- | -- | -- | 0.269 | 18.7 | -- | -- | -- | -- |
| 148.13 | 0.567 | 8.96 | -- | -- | 1.98 | -- | -- | 0.065 | -- | 24 | 387 | -- | -- |
| 265.41 | 0.76 | 8.92 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 3 | 75.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 14 | 77.54 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 16 | 77.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 18 | 77.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 21 | 77.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 32 | 78.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 37 | 78.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 41 | 78.53 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 50 | 78.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 55 | 78.77 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 75 | 79.01 | temperature | 15 | 90 | > th | dose dependent | sin | 23 | NA |
| 90 | 79.19 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 94 | 79.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 113 | 79.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 140 | 79.74 | temperature | 30 | 90 | < th | dose dependent | sin | 23 | NA |
| 149 | 79.82 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 159 | 79.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 184 | 80.07 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 195 | 80.13 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 201 | 80.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 208 | 80.29 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 220 | 80.33 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 221 | 80.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 250 | 80.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 312 | 80.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 324 | 80.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 13 |
| 351 | 80.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 384 | 81.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 438 | 81.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 441 | 81.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 499 | 81.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 531 | 81.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 538 | 81.58 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 606 | 81.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 623 | 81.81 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 18 |
| 655 | 81.90 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 718 | 82.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 828 | 82.27 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 947 | 82.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |