Os03g0663700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein).
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Os03g0663700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.24 | 0.562 | 7.66 | 1.04 | 1.77 | -1.59 | 1.72 | 3.8 | 0.367 | 17.7 | 22.13 | 1338 | -- | -- |
| 145.39 | 0.562 | 7.72 | 0.38 | 1.81 | -1.62 | 1.58 | -- | 0.372 | 17.6 | 18.91 | 9834 | -- | -- |
| 149.92 | 0.57 | 7.66 | 0.987 | 1.82 | -1.55 | -- | 3.51 | 0.351 | 17.5 | 22.6 | 1443 | -- | -- |
| 149.34 | 0.569 | 7.71 | 0.602 | 1.81 | -2.01 | -- | -- | 0.396 | 17.5 | 13.85 | 9990 | -- | -- |
| 311.61 | 0.822 | 7.64 | 0.934 | -- | -1.86 | -- | 3.77 | 0.265 | -- | 23.8 | 1310 | -- | -- |
| 211.23 | 0.681 | 7.86 | -0.558 | 1.87 | -- | 1.62 | -- | -0.244 | 17.5 | -- | -- | -- | -- |
| 217.54 | 0.691 | 7.85 | -0.562 | 1.88 | -- | -- | -- | -0.237 | 17.3 | -- | -- | -- | -- |
| 321.29 | 0.835 | 7.67 | 0.61 | -- | -2.15 | -- | -- | 0.402 | -- | 13.8 | 9938 | -- | -- |
| 154.45 | 0.579 | 7.75 | -- | 1.82 | -1.71 | -- | -- | 0.233 | 17.5 | 13.15 | 8496 | -- | -- |
| 402.16 | 0.937 | 7.83 | -0.626 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 225.85 | 0.703 | 7.84 | -- | 1.89 | -- | -- | -- | -0.174 | 17.3 | -- | -- | -- | -- |
| 323.67 | 0.838 | 7.67 | -- | -- | -1.48 | -- | -- | 0.275 | -- | 22.22 | 9931 | -- | -- |
| 412.5 | 0.948 | 7.81 | -- | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.06 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 133.32 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 3 | 134.14 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 29 | 136.43 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 31 | 136.80 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 32 | 136.94 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 33 | 137.08 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 47 | 137.68 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 49 | 137.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 59 | 137.88 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 73 | 138.04 | temperature | 15 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 80 | 138.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 99 | 138.71 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 101 | 138.88 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 102 | 138.91 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 108 | 138.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 135 | 139.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 145 | 139.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 155 | 139.67 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 173 | 139.85 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 189 | 140.03 | radiation | 20 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 194 | 140.13 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 195 | 140.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 198 | 140.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 200 | 140.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 211 | 140.40 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 214 | 140.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 215 | 140.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 249 | 140.81 | radiation | 20 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 254 | 140.83 | radiation | 20 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 257 | 140.84 | radiation | 20 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 275 | 141.04 | radiation | 20 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 291 | 141.17 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 301 | 141.25 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 413 | 142.05 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 446 | 142.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 449 | 142.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 451 | 142.25 | temperature | 25 | 4320 | < th | dose independent | sin | 0 | NA |
| 458 | 142.30 | temperature | 25 | 4320 | > th | dose independent | sin | 1 | NA |
| 483 | 142.42 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 510 | 142.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 547 | 142.70 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 555 | 142.75 | humidity | 90 | 14400 | < th | dose independent | sin | 16 | NA |
| 563 | 142.77 | temperature | 20 | 4320 | > th | dose dependent | sin | 0 | NA |
| 585 | 142.87 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 646 | 143.06 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 12 |
| 658 | 143.09 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 669 | 143.11 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 692 | 143.18 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 714 | 143.25 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 717 | 143.26 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 747 | 143.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 801 | 143.43 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 857 | 143.58 | wind | 3 | 43200 | > th | dose dependent | sin | 3 | NA |
| 858 | 143.58 | temperature | 10 | 4320 | > th | dose dependent | sin | 23 | NA |
| 896 | 143.68 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 966 | 143.82 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 983 | 143.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 3 |