Os03g0660000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0660000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 692.62 | 1.24 | 6.1 | 0.717 | 0.934 | -1.31 | -1.39 | -4.99 | -1.03 | 21.7 | 21.01 | 1438 | -- | -- |
| 735.86 | 1.27 | 5.94 | 1.67 | 0.762 | -0.661 | -1.47 | -- | -0.808 | 21 | 22.11 | 1466 | -- | -- |
| 699.67 | 1.23 | 6.1 | 0.758 | 0.946 | -1.31 | -- | -5.04 | -1.03 | 21.5 | 21.07 | 1419 | -- | -- |
| 742.94 | 1.28 | 5.94 | 1.73 | 0.776 | -0.677 | -- | -- | -0.801 | 20.6 | 22.2 | 1445 | -- | -- |
| 751.1 | 1.28 | 6.07 | 0.692 | -- | -1.24 | -- | -4.96 | -1.04 | -- | 21.2 | 1471 | -- | -- |
| 761.21 | 1.29 | 5.99 | 1.48 | 0.924 | -- | -1.47 | -- | -1 | 21.6 | -- | -- | -- | -- |
| 769.15 | 1.3 | 5.99 | 1.54 | 0.937 | -- | -- | -- | -0.997 | 21.4 | -- | -- | -- | -- |
| 775.14 | 1.3 | 5.91 | 1.77 | -- | -0.83 | -- | -- | -0.764 | -- | 22.2 | 1445 | -- | -- |
| 819.05 | 1.34 | 6 | -- | 0.819 | -0.461 | -- | -- | -1.05 | 21 | 22.2 | 1445 | -- | -- |
| 820.58 | 1.34 | 5.97 | 1.55 | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
| 831.63 | 1.35 | 6.03 | -- | 0.938 | -- | -- | -- | -1.17 | 21.5 | -- | -- | -- | -- |
| 855.3 | 1.37 | 5.97 | -- | -- | -0.646 | -- | -- | -1.01 | -- | 22.2 | 1445 | -- | -- |
| 883.57 | 1.39 | 6 | -- | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 660.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 2 | 660.32 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 661.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 4 | 662.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 5 | 663.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 6 | 663.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 7 | 663.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 8 | 663.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 11 | 665.66 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 12 | 665.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 17 | 670.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 19 | 671.25 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 20 | 671.38 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 25 | 672.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 33 | 673.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 34 | 673.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 35 | 673.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 36 | 673.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 38 | 673.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 45 | 674.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 46 | 674.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 55 | 674.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 58 | 674.94 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 62 | 675.21 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 64 | 675.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 66 | 675.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 81 | 676.36 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 82 | 676.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 83 | 676.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 86 | 676.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 95 | 677.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 98 | 677.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 111 | 678.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 129 | 679.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 149 | 679.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 179 | 680.99 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 185 | 681.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 227 | 682.21 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 231 | 682.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 251 | 682.95 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 9 |
| 253 | 682.98 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 265 | 683.35 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 266 | 683.35 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 284 | 683.87 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 293 | 684.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 294 | 684.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 301 | 684.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 302 | 684.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 308 | 684.39 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 309 | 684.39 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 316 | 684.52 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 327 | 684.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 329 | 684.73 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 335 | 684.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 336 | 684.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 340 | 685.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 342 | 685.09 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 344 | 685.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 358 | 685.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 366 | 685.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 367 | 685.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 451 | 686.72 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 457 | 686.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 464 | 686.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 465 | 686.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 485 | 687.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 553 | 687.83 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 562 | 688.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 572 | 688.14 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 575 | 688.18 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 577 | 688.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 612 | 688.87 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 631 | 689.02 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 666 | 689.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 675 | 689.48 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 707 | 689.94 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 716 | 690.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 720 | 690.04 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 753 | 690.39 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 8 |
| 789 | 690.85 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 802 | 690.93 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 807 | 691.04 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 818 | 691.20 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 844 | 691.34 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 862 | 691.47 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 947 | 692.23 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |