Os03g0659300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
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Os03g0659300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.32 | 0.25 | 13.1 | -0.456 | 1.08 | -0.847 | -0.00341 | 0.27 | -0.114 | 10.6 | 62.35 | 878 | -- | -- |
| 28.38 | 0.248 | 13.1 | -0.432 | 1.08 | -0.842 | 0.0872 | -- | -0.118 | 10.6 | 63.61 | 895 | -- | -- |
| 28.31 | 0.248 | 13.1 | -0.454 | 1.08 | -0.849 | -- | 0.268 | -0.115 | 10.7 | 62.85 | 891 | -- | -- |
| 28.41 | 0.248 | 13.1 | -0.429 | 1.07 | -0.836 | -- | -- | -0.117 | 10.7 | 63.74 | 895 | -- | -- |
| 48.96 | 0.328 | 13.1 | -0.424 | -- | -0.662 | -- | 0.41 | -0.0979 | -- | 62.85 | 891 | -- | -- |
| 38.5 | 0.291 | 13.1 | -0.416 | 0.737 | -- | 0.000801 | -- | -0.0607 | 11.1 | -- | -- | -- | -- |
| 38.5 | 0.291 | 13.1 | -0.416 | 0.737 | -- | -- | -- | -0.0607 | 11.1 | -- | -- | -- | -- |
| 49.38 | 0.329 | 13.1 | -0.41 | -- | -0.645 | -- | -- | -0.0987 | -- | 63.74 | 895 | -- | -- |
| 33.21 | 0.268 | 13.1 | -- | 1.08 | -0.853 | -- | -- | -0.0713 | 10.7 | 65.48 | 895 | -- | -- |
| 72.37 | 0.397 | 13.1 | -0.433 | -- | -- | -- | -- | -0.0667 | -- | -- | -- | -- | -- |
| 43.06 | 0.307 | 13.1 | -- | 0.741 | -- | -- | -- | -0.0143 | 11.1 | -- | -- | -- | -- |
| 53.66 | 0.342 | 13.1 | -- | -- | -0.638 | -- | -- | -0.0594 | -- | 65.48 | 895 | -- | -- |
| 77.32 | 0.41 | 13.1 | -- | -- | -- | -- | -- | -0.0186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.16 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 2 | 27.28 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 9 | 27.30 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 10 | 27.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 14 | 27.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 17 | 27.37 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 19 | 27.38 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 25 | 27.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 10 |
| 30 | 27.43 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 34 | 27.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 42 | 27.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 57 | 27.52 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 128 | 27.73 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 135 | 27.77 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 157 | 27.80 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 225 | 27.97 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 298 | 28.28 | humidity | 60 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 319 | 28.37 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 501 | 28.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 521 | 28.86 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 557 | 28.91 | humidity | 70 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 591 | 28.97 | humidity | 70 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 631 | 29.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 13 |
| 659 | 29.07 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 666 | 29.08 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 833 | 29.20 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |
| 845 | 29.20 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 853 | 29.21 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 873 | 29.23 | humidity | 60 | 720 | > th | dose dependent | no | NA | NA |
| 883 | 29.24 | radiation | 10 | 1440 | > th | dose independent | sin | 21 | NA |