Os03g0658800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os03g0658800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.96 | 0.465 | 3.03 | -0.703 | 0.0395 | 3.5 | 0.186 | -20.5 | 0.106 | 8.23 | 996.4 | 1834 | -- | -- |
| 97.86 | 0.461 | 2.98 | -0.3 | 0.0314 | 2.82 | 0.194 | -- | 0.106 | 7.54 | 993.7 | 2104 | -- | -- |
| 98.02 | 0.461 | 3.03 | -0.715 | 0.0368 | 3.49 | -- | -20.5 | 0.107 | 10 | 996.1 | 1841 | -- | -- |
| 97.93 | 0.461 | 2.97 | -0.297 | 0.0358 | 2.81 | -- | -- | 0.108 | 10.2 | 994.6 | 2561 | -- | -- |
| 98.11 | 0.461 | 3.03 | -0.715 | -- | 3.49 | -- | -20.6 | 0.106 | -- | 996 | 1842 | -- | -- |
| 120.55 | 0.515 | 2.98 | -0.387 | 0.0949 | -- | -0.215 | -- | 0.0733 | 12.3 | -- | -- | -- | -- |
| 120.72 | 0.515 | 2.98 | -0.396 | 0.0981 | -- | -- | -- | 0.0717 | 11.4 | -- | -- | -- | -- |
| 98.02 | 0.461 | 2.98 | -0.295 | -- | 2.82 | -- | -- | 0.106 | -- | 994.6 | 2529 | -- | -- |
| 100.2 | 0.466 | 2.97 | -- | 0.038 | 2.9 | -- | -- | 0.139 | 10.2 | 994.5 | 2582 | -- | -- |
| 121.32 | 0.515 | 2.98 | -0.398 | -- | -- | -- | -- | 0.0708 | -- | -- | -- | -- | -- |
| 124.84 | 0.523 | 2.97 | -- | 0.102 | -- | -- | -- | 0.116 | 11.6 | -- | -- | -- | -- |
| 100.29 | 0.466 | 2.97 | -- | -- | 2.91 | -- | -- | 0.139 | -- | 994.4 | 2472 | -- | -- |
| 125.5 | 0.523 | 2.97 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.62 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 2 | 97.75 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 3 | 97.75 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 8 | 97.75 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 155 | 97.75 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 156 | 97.75 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 161 | 97.75 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 319 | 98.37 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 320 | 98.40 | atmosphere | 995 | 4320 | < th | dose dependent | sin | 8 | NA |
| 321 | 98.42 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 328 | 98.61 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 354 | 99.24 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 400 | 99.90 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 459 | 100.30 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 21 | NA |
| 467 | 100.33 | radiation | 30 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 510 | 100.55 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 513 | 100.57 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 690 | 101.84 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 731 | 102.11 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 734 | 102.15 | atmosphere | 1000 | 1440 | < th | dose dependent | no | NA | NA |
| 807 | 103.12 | radiation | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 863 | 103.79 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 870 | 103.82 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 896 | 104.13 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 910 | 104.29 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 965 | 104.77 | atmosphere | 1000 | 1440 | < th | dose independent | sin | 16 | NA |