Os03g0655400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Water stress induced protein.
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Os03g0655400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Water stress induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.25 | 0.38 | 16.1 | -0.482 | 0.146 | 1.3 | 0.192 | 4.12 | -0.14 | 22.5 | 5.4 | 4289 | -- | -- |
| 74.23 | 0.401 | 16 | -0.525 | 0.181 | 0.741 | 0.422 | -- | -0.025 | 23.8 | 5.463 | 4425 | -- | -- |
| 65.07 | 0.376 | 16.1 | -0.52 | 0.124 | 1.27 | -- | 4.24 | -0.126 | 21.6 | 5.5 | 4196 | -- | -- |
| 73.36 | 0.399 | 16 | -0.537 | 0.131 | 0.689 | -- | -- | -0.0788 | 22.5 | 5.568 | 4461 | -- | -- |
| 65.77 | 0.378 | 16.1 | -0.529 | -- | 1.3 | -- | 4.45 | -0.11 | -- | 5.472 | 4105 | -- | -- |
| 81.96 | 0.424 | 16 | -0.774 | 0.0749 | -- | 0.175 | -- | -0.101 | 22.9 | -- | -- | -- | -- |
| 82.04 | 0.424 | 16 | -0.78 | 0.0815 | -- | -- | -- | -0.101 | 21.5 | -- | -- | -- | -- |
| 74.35 | 0.402 | 16 | -0.537 | -- | 0.671 | -- | -- | -0.0789 | -- | 5.539 | 4466 | -- | -- |
| 80.44 | 0.418 | 16 | -- | 0.12 | 0.997 | -- | -- | 0.0222 | 22.4 | 5.554 | 20108 | -- | -- |
| 82.43 | 0.424 | 16 | -0.779 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 98.07 | 0.463 | 16 | -- | 0.0822 | -- | -- | -- | -0.0138 | 20.7 | -- | -- | -- | -- |
| 78.74 | 0.413 | 16 | -- | -- | 0.74 | -- | -- | 0.144 | -- | 5.6 | 47520 | -- | -- |
| 98.46 | 0.463 | 16 | -- | -- | -- | -- | -- | -0.0144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.70 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 5 | 63.08 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 7 | 63.19 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 12 | 63.36 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 16 | 63.44 | wind | 7 | 4320 | < th | dose independent | sin | 15 | NA |
| 18 | 63.45 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 20 | 63.49 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 25 | 63.51 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 59 | 63.64 | wind | 7 | 4320 | > th | dose independent | sin | 15 | NA |
| 80 | 63.71 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 102 | 63.74 | atmosphere | 1005 | 14400 | < th | dose dependent | sin | 14 | NA |
| 130 | 63.79 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 299 | 63.93 | atmosphere | 1005 | 14400 | < th | dose dependent | no | NA | NA |
| 309 | 63.93 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 369 | 63.99 | wind | 7 | 4320 | > th | dose dependent | sin | 14 | NA |
| 419 | 64.05 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 432 | 64.06 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 447 | 64.07 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 458 | 64.08 | wind | 7 | 4320 | < th | dose independent | rect. | 13 | 21 |
| 466 | 64.09 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 482 | 64.10 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 506 | 64.11 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 517 | 64.12 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 552 | 64.14 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 659 | 64.18 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 700 | 64.21 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 764 | 64.24 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 16 | NA |
| 814 | 64.26 | wind | 5 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 847 | 64.29 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 16 | NA |
| 924 | 64.33 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 949 | 64.34 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 992 | 64.36 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 21 |