Os03g0655200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Membrin 11 (AtMEMB11) (Golgi SNAP receptor complex member 2-1) (27 kDa Golgi SNARE protein).
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Os03g0655200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Membrin 11 (AtMEMB11) (Golgi SNAP receptor complex member 2-1) (27 kDa Golgi SNARE protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.45 | 0.227 | 11.4 | 0.329 | 0.63 | -0.477 | -0.58 | -0.17 | 0.0984 | 5.3 | 12.34 | 89 | -- | -- |
| 23.49 | 0.226 | 11.4 | 0.331 | 0.63 | -0.469 | -0.558 | -- | 0.0985 | 5.35 | 10.96 | 89 | -- | -- |
| 24.23 | 0.229 | 11.4 | 0.331 | 0.621 | -0.485 | -- | -0.0305 | 0.0995 | 5.44 | 10.43 | 87 | -- | -- |
| 24.08 | 0.229 | 11.4 | 0.324 | 0.597 | -0.488 | -- | -- | 0.101 | 5.49 | 7.757 | 113 | -- | -- |
| 32.37 | 0.265 | 11.3 | 0.388 | -- | -0.814 | -- | 0.579 | 0.162 | -- | -12.74 | 405 | -- | -- |
| 26.88 | 0.243 | 11.4 | 0.319 | 0.731 | -- | -0.59 | -- | 0.0773 | 4.37 | -- | -- | -- | -- |
| 27.83 | 0.247 | 11.4 | 0.324 | 0.727 | -- | -- | -- | 0.0804 | 4.37 | -- | -- | -- | -- |
| 32.87 | 0.267 | 11.4 | 0.373 | -- | -0.8 | -- | -- | 0.154 | -- | -12.94 | 375 | -- | -- |
| 26.71 | 0.241 | 11.4 | -- | 0.601 | -0.482 | -- | -- | 0.0587 | 5.22 | 15.34 | 152 | -- | -- |
| 56.21 | 0.35 | 11.4 | 0.353 | -- | -- | -- | -- | 0.0997 | -- | -- | -- | -- | -- |
| 30.6 | 0.259 | 11.4 | -- | 0.733 | -- | -- | -- | 0.0443 | 4.36 | -- | -- | -- | -- |
| 36.54 | 0.282 | 11.4 | -- | -- | -0.793 | -- | -- | 0.112 | -- | -7.984 | 375 | -- | -- |
| 59.5 | 0.36 | 11.4 | -- | -- | -- | -- | -- | 0.0605 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.58 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 4 | 21.77 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 14 | 22.02 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 31 | 22.15 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 38 | 22.18 | radiation | 30.0 | 10 | < th | dose independent | rect. | 5 | 16 |
| 40 | 22.20 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 53 | 22.26 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 70 | 22.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 108 | 22.48 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 115 | 22.51 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 121 | 22.52 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 125 | 22.53 | radiation | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 135 | 22.55 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 138 | 22.55 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 182 | 22.61 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 217 | 22.68 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 220 | 22.69 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 246 | 22.71 | radiation | 10.0 | 270 | < th | dose independent | sin | 4 | NA |
| 304 | 22.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 307 | 22.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 308 | 22.81 | radiation | 20.0 | 270 | < th | dose independent | sin | 9 | NA |
| 309 | 22.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 312 | 22.81 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 317 | 22.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 319 | 22.81 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 415 | 22.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 420 | 22.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 425 | 22.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 428 | 22.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 429 | 22.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 434 | 22.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 452 | 22.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 453 | 22.93 | radiation | 40.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 459 | 22.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 461 | 22.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 462 | 22.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 464 | 22.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 465 | 22.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 471 | 22.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 472 | 22.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 477 | 22.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 492 | 22.96 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 501 | 22.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 502 | 22.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 503 | 22.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 504 | 22.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 506 | 22.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 507 | 22.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 514 | 22.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 515 | 22.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 522 | 22.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 533 | 22.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 552 | 22.99 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 565 | 23.00 | radiation | 40.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 566 | 23.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 603 | 23.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 612 | 23.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 617 | 23.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 620 | 23.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 624 | 23.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 627 | 23.04 | radiation | 40.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 633 | 23.05 | radiation | 20.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 642 | 23.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 659 | 23.06 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 682 | 23.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 685 | 23.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 686 | 23.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 687 | 23.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 688 | 23.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 692 | 23.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 693 | 23.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 701 | 23.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 704 | 23.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 706 | 23.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 707 | 23.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 710 | 23.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 711 | 23.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 733 | 23.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 743 | 23.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 747 | 23.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 769 | 23.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 789 | 23.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 833 | 23.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 848 | 23.15 | radiation | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 862 | 23.15 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 887 | 23.16 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 22 |
| 942 | 23.19 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 946 | 23.20 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 955 | 23.21 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 996 | 23.23 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 7 |