Os03g0652000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
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Os03g0652000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.22 | 0.58 | 6.37 | 1.67 | 1.18 | 2.32 | 0.629 | -2.05 | -0.299 | 8.97 | 24.4 | 2888 | -- | -- |
| 148.86 | 0.568 | 6.43 | 1.46 | 1.16 | 2.26 | 0.651 | -- | -0.425 | 8.72 | 21.7 | 2661 | -- | -- |
| 153.49 | 0.577 | 6.38 | 1.69 | 1.17 | 2.37 | -- | -2.1 | -0.309 | 9.01 | 24.53 | 2891 | -- | -- |
| 148.23 | 0.567 | 6.42 | 1.44 | 1.1 | 2.36 | -- | -- | -0.373 | 8.86 | 21.9 | 2583 | -- | -- |
| 201.35 | 0.661 | 6.38 | 1.71 | -- | 2.46 | -- | -2.14 | -0.214 | -- | 24.7 | 2250 | -- | -- |
| 289 | 0.797 | 6.61 | 0.207 | 1.18 | -- | 0.464 | -- | -1.18 | 9.76 | -- | -- | -- | -- |
| 289.82 | 0.797 | 6.61 | 0.225 | 1.17 | -- | -- | -- | -1.18 | 9.79 | -- | -- | -- | -- |
| 202.72 | 0.663 | 6.44 | 1.27 | -- | 2.29 | -- | -- | -0.401 | -- | 22 | 2227 | -- | -- |
| 166.06 | 0.6 | 6.49 | -- | 1.05 | 1.66 | -- | -- | -0.651 | 9.23 | 22.87 | 2136 | -- | -- |
| 371.77 | 0.901 | 6.64 | 0.214 | -- | -- | -- | -- | -1.18 | -- | -- | -- | -- | -- |
| 291.15 | 0.798 | 6.61 | -- | 1.17 | -- | -- | -- | -1.2 | 9.78 | -- | -- | -- | -- |
| 225.92 | 0.7 | 6.51 | -- | -- | 1.85 | -- | -- | -0.587 | -- | 22.6 | 2240 | -- | -- |
| 372.97 | 0.901 | 6.64 | -- | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 6 | 143.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 28 | 144.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 48 | 144.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 80 | 144.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 140 | 145.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 226 | 146.28 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 260 | 146.60 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 319 | 147.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 532 | 149.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 601 | 150.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |