Os03g0651700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0651700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.83 | 0.56 | 7.49 | 3.42 | 0.589 | -1.74 | -0.797 | -4.58 | 0.375 | 8.59 | 0.9596 | 4316 | -- | -- |
| 166.25 | 0.601 | 7.49 | 3.27 | 0.63 | -1.35 | -0.614 | -- | 0.431 | 8.91 | 2.481 | 7170 | -- | -- |
| 143.27 | 0.557 | 7.48 | 3.38 | 0.641 | -1.73 | -- | -4.57 | 0.388 | 8.12 | 0.9047 | 4296 | -- | -- |
| 163.53 | 0.596 | 7.58 | 3.11 | 0.656 | -1.24 | -- | -- | 0.243 | 7.97 | 3.388 | 8646 | -- | -- |
| 160.47 | 0.59 | 7.48 | 3.46 | -- | -1.8 | -- | -4.49 | 0.317 | -- | 1.518 | 8674 | -- | -- |
| 201.84 | 0.666 | 7.52 | 2.75 | 0.601 | -- | -0.719 | -- | 0.468 | 8.21 | -- | -- | -- | -- |
| 202.97 | 0.667 | 7.52 | 2.72 | 0.616 | -- | -- | -- | 0.466 | 7.67 | -- | -- | -- | -- |
| 174.57 | 0.615 | 7.58 | 2.7 | -- | -1.45 | -- | -- | 0.205 | -- | 2.541 | 8719 | -- | -- |
| 299.63 | 0.806 | 7.75 | -- | 0.755 | -1.45 | -- | -- | -0.409 | 7.48 | 10 | 12932 | -- | -- |
| 223.42 | 0.698 | 7.54 | 2.73 | -- | -- | -- | -- | 0.475 | -- | -- | -- | -- | -- |
| 398.29 | 0.934 | 7.59 | -- | 0.64 | -- | -- | -- | 0.163 | 7.37 | -- | -- | -- | -- |
| 178.79 | 0.623 | 7.75 | -- | -- | -2.4 | -- | -- | -0.497 | -- | 0.019 | 47520 | -- | -- |
| 420.1 | 0.957 | 7.61 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 130.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 9 | 131.92 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 11 | 132.55 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 14 | 132.86 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 24 | 133.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 25 | 133.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 26 | 133.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 28 | 133.09 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 30 | 133.11 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 32 | 133.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 34 | 133.16 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 37 | 133.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 45 | 133.46 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 46 | 133.47 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 48 | 133.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 51 | 133.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 53 | 133.65 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 55 | 133.68 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 56 | 133.70 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 57 | 133.74 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 58 | 133.76 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 59 | 133.81 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 60 | 133.82 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 89 | 133.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 121 | 133.97 | temperature | 30.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 153 | 134.05 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 154 | 134.06 | temperature | 30.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 155 | 134.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 157 | 134.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 200 | 134.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 234 | 134.37 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 238 | 134.49 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 239 | 134.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 245 | 134.54 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 248 | 134.58 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 250 | 134.60 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 251 | 134.61 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 252 | 134.61 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 255 | 134.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 260 | 134.67 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 272 | 134.74 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 19 |
| 291 | 134.81 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 292 | 134.81 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 312 | 134.87 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 344 | 135.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 355 | 135.09 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 362 | 135.10 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 14 |
| 393 | 135.23 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 397 | 135.25 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 400 | 135.27 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 401 | 135.27 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 409 | 135.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 410 | 135.32 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 421 | 135.38 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 424 | 135.39 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 441 | 135.40 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 448 | 135.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 453 | 135.45 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 485 | 135.55 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 509 | 135.64 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 517 | 135.67 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 530 | 135.69 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 532 | 135.69 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 15 |
| 549 | 135.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 571 | 135.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 572 | 135.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 625 | 135.88 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 661 | 135.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 670 | 135.93 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 702 | 136.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 726 | 136.03 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 740 | 136.07 | radiation | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 768 | 136.10 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 775 | 136.12 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 810 | 136.13 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 811 | 136.14 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 841 | 136.16 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 856 | 136.21 | radiation | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 861 | 136.21 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 20 | NA |
| 882 | 136.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 922 | 136.32 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 954 | 136.39 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 956 | 136.40 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 957 | 136.40 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 958 | 136.40 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 992 | 136.44 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 11 |