Os03g0648100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
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Os03g0648100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF266, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.64 | 0.331 | 10.8 | 0.284 | 1.48 | -0.0655 | 0.159 | 5.9 | 0.0157 | 5.99 | 28.2 | 2381 | -- | -- |
| 54.11 | 0.343 | 10.9 | -0.763 | 1.49 | 0.524 | 0.665 | -- | -0.124 | 5.61 | 30.51 | 5964 | -- | -- |
| 49.7 | 0.328 | 10.8 | 0.286 | 1.48 | -0.0655 | -- | 5.88 | 0.0151 | 5.99 | 28.2 | 2389 | -- | -- |
| 52.66 | 0.338 | 10.9 | -0.838 | 1.47 | 0.465 | -- | -- | -0.125 | 5.8 | 29.5 | 5762 | -- | -- |
| 159.01 | 0.587 | 10.7 | 0.749 | -- | -0.141 | -- | 6.6 | 0.131 | -- | 27.04 | 2744 | -- | -- |
| 65.12 | 0.378 | 10.9 | -0.703 | 1.5 | -- | 0.173 | -- | -0.172 | 5.83 | -- | -- | -- | -- |
| 65.19 | 0.378 | 10.9 | -0.702 | 1.5 | -- | -- | -- | -0.173 | 5.84 | -- | -- | -- | -- |
| 161.03 | 0.591 | 10.9 | -0.79 | -- | 0.681 | -- | -- | -0.203 | -- | 31.8 | 7042 | -- | -- |
| 70.78 | 0.392 | 10.9 | -- | 1.44 | 0.339 | -- | -- | -0.129 | 5.81 | 32.3 | 7167 | -- | -- |
| 182.06 | 0.63 | 10.9 | -0.656 | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
| 78.18 | 0.414 | 10.9 | -- | 1.49 | -- | -- | -- | -0.0949 | 5.86 | -- | -- | -- | -- |
| 177.16 | 0.62 | 10.9 | -- | -- | 0.47 | -- | -- | -0.0637 | -- | 33.5 | 7021 | -- | -- |
| 193.41 | 0.649 | 10.9 | -- | -- | -- | -- | -- | -0.0652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 49.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 4 | 49.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 11 | 49.77 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 17 |
| 15 | 50.04 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 19 |
| 18 | 50.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 29 | 50.33 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 30 | 50.34 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 32 | 50.34 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 34 | 50.35 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 37 | 50.38 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 39 | 50.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 41 | 50.39 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 19 |
| 44 | 50.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 50 | 50.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 53 | 50.55 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 17 |
| 60 | 50.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 71 | 50.63 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 10 |
| 83 | 50.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 84 | 50.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 85 | 50.66 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 3 |
| 105 | 50.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 107 | 50.68 | temperature | 30 | 720 | < th | dose independent | sin | 11 | NA |
| 113 | 50.70 | temperature | 30 | 720 | > th | dose independent | sin | 11 | NA |
| 117 | 50.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 148 | 50.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 199 | 50.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 216 | 50.97 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 224 | 51.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 231 | 51.02 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 261 | 51.10 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 271 | 51.13 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 297 | 51.16 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 342 | 51.25 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 13 |
| 376 | 51.27 | temperature | 30 | 1440 | > th | dose dependent | sin | 3 | NA |
| 394 | 51.30 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 496 | 51.36 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 508 | 51.38 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 622 | 51.39 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 14 |
| 627 | 51.41 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 757 | 51.43 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 826 | 51.49 | radiation | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 831 | 51.50 | temperature | 30 | 720 | < th | dose independent | sin | 14 | NA |
| 854 | 51.53 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 20 |
| 921 | 51.58 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 934 | 51.60 | wind | 5 | 43200 | > th | dose independent | sin | 10 | NA |
| 945 | 51.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 953 | 51.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 970 | 51.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 995 | 51.64 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |