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Os03g0643300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AER123Wp.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0224) R2 : 0.0921
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.32 (0.0471) R2dN8 : 0.119 R2N8 : 0.0921
σ : 0.422
deviance : 81.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.83 0.315 10.6 0.219 0.391 1.05 1.24 2.33 -0.201 15.1 1.1 4297 -- --
48.43 0.324 10.6 0.612 0.437 0.845 1.36 -- -0.0661 14.7 3.067 8642 -- --
49.05 0.326 10.7 0.122 0.393 1.13 -- 3.05 -0.242 15.7 0.7247 4258 -- --
51.44 0.334 10.6 0.684 0.42 0.749 -- -- -0.0743 16.1 3.185 15728 -- --
56.36 0.35 10.7 0.145 -- 1.3 -- 3.18 -0.213 -- 0.9293 4243 -- --
58.16 0.358 10.6 0.444 0.437 -- 1.38 -- -0.267 14.8 -- -- -- --
64.4 0.376 10.6 0.477 0.455 -- -- -- -0.258 15.4 -- -- -- --
60.37 0.362 10.6 0.754 -- 0.769 -- -- -0.00249 -- 3.264 15741 -- --
62.59 0.368 10.6 -- 0.384 0.549 -- -- -0.0764 15.4 7.33 8560 -- --
76.03 0.407 10.6 0.458 -- -- -- -- -0.27 -- -- -- -- --
70.4 0.392 10.6 -- 0.446 -- -- -- -0.311 15.4 -- -- -- --
71.64 0.394 10.6 -- -- 0.648 -- -- -0.0721 -- 6.613 8536 -- --
81.56 0.422 10.6 -- -- -- -- -- -0.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.35 radiation 40.0 14400 > th dose dependent rect. 14 19
2 41.65 humidity 90.0 14400 < th dose independent rect. 24 1
4 41.75 humidity 90.0 14400 > th dose independent rect. 1 2
5 41.78 radiation 40.0 14400 > th dose dependent rect. 14 1
7 41.83 humidity 90.0 14400 > th dose dependent rect. 5 2
24 41.88 atmosphere 1005.0 43200 > th dose independent rect. 17 1
26 41.88 humidity 90.0 14400 > th dose dependent rect. 1 1
27 41.89 humidity 90.0 14400 > th dose dependent rect. 1 6
28 41.90 atmosphere 1005.0 43200 < th dose independent rect. 17 1
32 41.94 humidity 90.0 14400 < th dose independent rect. 22 5
34 41.96 radiation 40.0 14400 < th dose dependent rect. 18 9
37 41.98 humidity 90.0 43200 > th dose dependent rect. 7 3
41 42.01 humidity 90.0 43200 > th dose dependent rect. 5 5
51 42.04 radiation 40.0 14400 < th dose dependent rect. 18 7
56 42.06 humidity 90.0 43200 > th dose dependent rect. 4 13
64 42.09 radiation 30.0 14400 < th dose independent rect. 15 17
66 42.09 humidity 90.0 43200 > th dose dependent rect. 4 10
93 42.16 humidity 90.0 43200 > th dose dependent sin 1 NA
103 42.18 radiation 30.0 14400 < th dose independent rect. 15 2
105 42.18 radiation 30.0 14400 < th dose independent rect. 15 10
144 42.25 precipitation 0.1 43200 < th dose independent rect. 5 2
146 42.25 precipitation 0.1 43200 < th dose dependent rect. 5 2
168 42.29 humidity 90.0 43200 > th dose independent rect. 3 7
172 42.30 precipitation 0.1 43200 > th dose dependent rect. 4 4
179 42.33 precipitation 0.1 43200 > th dose independent rect. 5 3
181 42.33 humidity 90.0 43200 > th dose independent rect. 2 12
183 42.33 humidity 90.0 43200 > th dose independent rect. 2 15
192 42.34 humidity 90.0 43200 > th dose independent rect. 2 10
208 42.35 precipitation 0.1 43200 > th dose dependent rect. 3 7
221 42.37 precipitation 0.1 43200 < th dose independent rect. 3 7
222 42.37 radiation 10.0 14400 < th dose dependent rect. 18 1
223 42.37 radiation 10.0 14400 < th dose dependent rect. 18 3
224 42.37 precipitation 0.1 43200 < th dose dependent rect. 3 7
227 42.38 humidity 90.0 43200 > th dose independent sin 3 NA
259 42.40 radiation 40.0 14400 > th dose dependent rect. 8 1
267 42.41 precipitation 0.1 43200 > th dose independent rect. 3 7
324 42.44 radiation 20.0 14400 > th dose dependent rect. 16 15
349 42.47 humidity 90.0 43200 > th dose independent rect. 7 1
362 42.48 humidity 80.0 43200 < th dose independent rect. 14 1
366 42.48 radiation 30.0 14400 > th dose independent rect. 15 17
425 42.51 humidity 90.0 43200 > th dose independent rect. 20 22
428 42.52 humidity 90.0 43200 > th dose independent no NA NA
436 42.52 humidity 90.0 43200 > th dose independent rect. 5 23
437 42.52 humidity 90.0 43200 > th dose independent rect. 11 23
448 42.53 radiation 1.0 43200 > th dose independent rect. 18 1
453 42.53 humidity 90.0 43200 > th dose independent rect. 7 3
473 42.53 humidity 90.0 43200 > th dose independent rect. 13 23
474 42.53 humidity 90.0 43200 > th dose independent rect. 15 23
480 42.54 humidity 90.0 43200 < th dose independent sin 4 NA
489 42.54 humidity 90.0 43200 < th dose independent rect. 24 20
501 42.54 humidity 90.0 43200 > th dose dependent rect. 15 23
503 42.55 humidity 80.0 43200 > th dose independent rect. 13 3
508 42.55 humidity 90.0 43200 < th dose independent rect. 22 20
516 42.55 humidity 90.0 43200 < th dose independent rect. 22 22
517 42.55 humidity 90.0 43200 > th dose independent rect. 9 23
518 42.55 humidity 90.0 43200 > th dose dependent no NA NA
528 42.55 humidity 90.0 43200 > th dose dependent rect. 19 23
553 42.56 humidity 90.0 43200 > th dose dependent rect. 11 23
557 42.57 humidity 80.0 43200 > th dose independent rect. 14 1
613 42.58 humidity 90.0 43200 < th dose independent rect. 6 22
630 42.59 humidity 90.0 43200 < th dose independent rect. 2 16
641 42.59 humidity 90.0 43200 < th dose independent rect. 2 23
652 42.59 humidity 90.0 43200 > th dose dependent rect. 9 23
656 42.60 atmosphere 1010.0 43200 < th dose independent rect. 7 1
712 42.62 humidity 90.0 43200 < th dose independent rect. 2 13
736 42.63 humidity 90.0 43200 < th dose independent no NA NA
741 42.63 humidity 80.0 43200 > th dose independent rect. 9 8
755 42.63 radiation 1.0 14400 < th dose dependent rect. 22 7
773 42.64 humidity 90.0 43200 < th dose independent rect. 22 16
776 42.64 humidity 90.0 43200 < th dose independent rect. 7 18
785 42.64 humidity 90.0 43200 < th dose independent rect. 16 22
786 42.64 humidity 90.0 43200 < th dose independent rect. 11 23
787 42.64 humidity 90.0 43200 < th dose independent rect. 13 23
806 42.65 humidity 90.0 43200 < th dose independent rect. 2 10
824 42.65 humidity 80.0 43200 > th dose dependent rect. 8 11
849 42.66 humidity 90.0 43200 < th dose independent rect. 9 23
866 42.67 humidity 90.0 43200 < th dose independent rect. 24 14
901 42.68 radiation 1.0 43200 < th dose independent rect. 18 7
906 42.68 humidity 90.0 14400 < th dose independent rect. 22 9
934 42.69 radiation 1.0 43200 < th dose independent rect. 18 5
976 42.69 radiation 1.0 14400 < th dose dependent rect. 18 17
980 42.70 humidity 90.0 43200 > th dose independent sin 19 NA
981 42.70 radiation 1.0 43200 < th dose independent rect. 18 1
992 42.70 radiation 1.0 43200 > th dose independent rect. 18 17