Os03g0643200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os03g0643200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.54 | 0.501 | 2.93 | -0.0958 | 0.226 | -0.447 | -0.182 | 1.43 | -0.13 | 12 | 1009 | 143 | -- | -- |
| 115.22 | 0.5 | 2.93 | -0.123 | 0.225 | -0.394 | -0.234 | -- | -0.0798 | 11.8 | 1016 | 220 | -- | -- |
| 113.67 | 0.497 | 2.93 | -0.1 | 0.224 | -0.451 | -- | 1.46 | -0.129 | 12.1 | 1009 | 146 | -- | -- |
| 115.41 | 0.5 | 2.93 | -0.13 | 0.22 | -0.395 | -- | -- | -0.0816 | 12.1 | 1044 | 319 | -- | -- |
| 116.71 | 0.503 | 2.94 | -0.101 | -- | -0.479 | -- | 1.44 | -0.136 | -- | 1010 | 275 | -- | -- |
| 116.88 | 0.507 | 2.92 | -0.144 | 0.236 | -- | -0.257 | -- | -0.0272 | 11.6 | -- | -- | -- | -- |
| 117.16 | 0.507 | 2.92 | -0.154 | 0.237 | -- | -- | -- | -0.0279 | 11.8 | -- | -- | -- | -- |
| 118.37 | 0.507 | 2.94 | -0.135 | -- | -0.371 | -- | -- | -0.105 | -- | 1010 | 416 | -- | -- |
| 115.84 | 0.501 | 2.93 | -- | 0.222 | -0.417 | -- | -- | -0.0698 | 12.1 | 1052 | 319 | -- | -- |
| 120.7 | 0.513 | 2.93 | -0.161 | -- | -- | -- | -- | -0.0309 | -- | -- | -- | -- | -- |
| 117.78 | 0.508 | 2.92 | -- | 0.239 | -- | -- | -- | -0.0108 | 11.9 | -- | -- | -- | -- |
| 118.83 | 0.508 | 2.94 | -- | -- | -0.467 | -- | -- | -0.0822 | -- | 1056 | 444 | -- | -- |
| 121.39 | 0.514 | 2.92 | -- | -- | -- | -- | -- | -0.0131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.21 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 107.57 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 1 |
| 5 | 108.24 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 7 | 108.32 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 4 |
| 18 | 108.71 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 7 |
| 19 | 108.73 | humidity | 80.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 21 | 108.80 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 25 | 108.80 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 3 |
| 27 | 108.81 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 33 | 108.81 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 38 | 108.82 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 44 | 108.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 74 | 109.60 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 116 | 110.64 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 117 | 110.67 | radiation | 10.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 120 | 110.70 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 140 | 110.90 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 10 | 5 |
| 142 | 110.93 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 148 | 110.99 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 169 | 111.09 | wind | 3.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 178 | 111.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 179 | 111.17 | wind | 7.0 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 199 | 111.31 | wind | 7.0 | 10 | > th | dose independent | rect. | 12 | 2 |
| 212 | 111.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 3 |
| 215 | 111.46 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 220 | 111.52 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 253 | 111.77 | wind | 1.0 | 10 | > th | dose independent | sin | 21 | NA |
| 265 | 111.80 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 275 | 111.88 | wind | 3.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 296 | 111.93 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 305 | 111.95 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 306 | 111.97 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 9 | 5 |
| 335 | 112.09 | wind | 5.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 350 | 112.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 352 | 112.17 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 359 | 112.19 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 13 | 21 |
| 365 | 112.22 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 374 | 112.25 | wind | 1.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 397 | 112.34 | radiation | 40.0 | 30 | > th | dose independent | rect. | 13 | 21 |
| 399 | 112.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 2 |
| 417 | 112.42 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 5 |
| 431 | 112.46 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 438 | 112.47 | wind | 5.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 451 | 112.54 | temperature | 30.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 453 | 112.54 | temperature | 25.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 459 | 112.55 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 10 |
| 511 | 112.68 | radiation | 40.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 521 | 112.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 3 |
| 523 | 112.70 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 527 | 112.70 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 12 |
| 560 | 112.76 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 564 | 112.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 571 | 112.78 | wind | 3.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 594 | 112.82 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 13 |
| 614 | 112.84 | radiation | 40.0 | 30 | > th | dose independent | sin | 12 | NA |
| 624 | 112.84 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 24 | 14 |
| 644 | 112.87 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 664 | 112.90 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 692 | 112.94 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 21 |
| 700 | 112.96 | wind | 3.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 715 | 112.98 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 3 |
| 745 | 113.01 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 15 |
| 762 | 113.04 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 768 | 113.05 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 3 |
| 772 | 113.05 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 779 | 113.05 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 784 | 113.06 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 789 | 113.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 801 | 113.07 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 2 | 22 |
| 807 | 113.08 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 811 | 113.08 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 821 | 113.09 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 831 | 113.10 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 3 |
| 841 | 113.11 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 846 | 113.11 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 10 |
| 847 | 113.12 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 14 |
| 872 | 113.14 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 1 |
| 906 | 113.16 | radiation | 20.0 | 90 | < th | dose independent | rect. | 10 | 6 |
| 916 | 113.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 917 | 113.16 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 954 | 113.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 978 | 113.21 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 21 | 17 |
| 979 | 113.21 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 20 |