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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0642200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0338) R2 : 0.103
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.515 (0.0711) R2dN8 : 0.133 R2N8 : 0.103
σ : 0.636
deviance : 185.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
167.41 0.608 2.94 0.168 0.582 0.528 -0.534 -0.662 0.507 6.44 1.045 8 -- --
167.86 0.603 2.95 0.142 0.574 0.476 -0.482 -- 0.502 6.48 1.051 7 -- --
168.11 0.604 2.94 0.158 0.579 0.521 -- -0.564 0.508 6.5 1.07 7 -- --
168.44 0.604 2.95 0.136 0.572 0.478 -- -- 0.504 6.51 1.052 7 -- --
183.82 0.635 2.95 0.122 -- 0.223 -- -0.167 0.525 -- 1.07 7 -- --
173.48 0.617 2.94 0.0933 0.468 -- -0.467 -- 0.516 7.04 -- -- -- --
174.04 0.618 2.94 0.0849 0.467 -- -- -- 0.517 7.17 -- -- -- --
183.85 0.632 2.96 0.122 -- 0.242 -- -- 0.52 -- 1.071 7 -- --
168.92 0.605 2.95 -- 0.57 0.463 -- -- 0.489 6.52 1.043 7 -- --
185.55 0.637 2.95 0.0936 -- -- -- -- 0.525 -- -- -- -- --
174.23 0.617 2.95 -- 0.468 -- -- -- 0.508 7.16 -- -- -- --
184.2 0.634 2.96 -- -- 0.203 -- -- 0.511 -- 1.071 7 -- --
185.78 0.636 2.96 -- -- -- -- -- 0.515 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 156.21 temperature 25.0 30 > th dose independent rect. 4 4
13 158.35 temperature 25.0 270 > th dose independent rect. 4 3
23 159.79 temperature 25.0 270 > th dose independent rect. 4 1
27 160.08 temperature 25.0 720 < th dose independent rect. 1 2
29 160.54 humidity 90.0 10 < th dose independent rect. 4 3
32 160.59 temperature 20.0 270 > th dose dependent rect. 3 4
40 161.03 temperature 25.0 10 > th dose independent rect. 6 2
47 161.38 temperature 20.0 270 > th dose dependent rect. 4 1
68 161.97 temperature 20.0 90 > th dose dependent rect. 6 1
69 162.00 wind 1.0 10 > th dose independent rect. 14 17
85 162.56 humidity 90.0 90 < th dose independent rect. 6 1
116 163.17 wind 1.0 90 > th dose independent rect. 13 18
128 163.37 temperature 25.0 720 < th dose independent rect. 24 8
140 163.70 wind 1.0 10 > th dose independent rect. 13 22
172 164.10 wind 1.0 30 > th dose independent rect. 4 3
189 164.37 temperature 20.0 10 > th dose dependent rect. 6 2
192 164.42 atmosphere 995.0 4320 > th dose independent rect. 7 1
196 164.44 wind 9.0 30 < th dose independent rect. 7 23
197 164.45 wind 9.0 1440 < th dose independent rect. 7 1
198 164.45 temperature 10.0 1440 > th dose independent rect. 7 1
202 164.45 temperature 30.0 1440 < th dose independent rect. 7 1
206 164.45 humidity 50.0 1440 > th dose independent rect. 7 1
212 164.45 atmosphere 1015.0 1440 < th dose independent rect. 7 1
213 164.45 temperature 10.0 1440 > th dose independent rect. 8 23
219 164.48 atmosphere 1005.0 30 < th dose dependent rect. 5 1
237 164.62 atmosphere 1000.0 30 > th dose independent rect. 6 1
244 164.68 wind 3.0 30 < th dose independent rect. 6 1
245 164.68 humidity 80.0 30 > th dose independent rect. 6 1
251 164.71 temperature 10.0 30 > th dose independent rect. 6 1
253 164.71 temperature 30.0 30 < th dose independent rect. 6 1
254 164.71 humidity 50.0 30 > th dose independent rect. 6 1
258 164.71 atmosphere 1015.0 30 < th dose independent rect. 6 1
259 164.71 radiation 20.0 30 < th dose independent rect. 6 1
262 164.71 precipitation 0.1 30 < th dose independent rect. 6 1
263 164.71 temperature 10.0 30 > th dose independent rect. 7 23
265 164.71 atmosphere 995.0 30 > th dose dependent rect. 6 1
266 164.71 precipitation 0.1 30 < th dose dependent rect. 6 1
268 164.72 radiation 1.0 30 > th dose independent rect. 6 1
269 164.72 radiation 40.0 30 < th dose dependent rect. 6 1
277 164.75 wind 1.0 30 > th dose independent rect. 6 1
280 164.76 wind 9.0 30 < th dose dependent rect. 6 1
287 164.79 humidity 50.0 30 > th dose dependent rect. 6 1
292 164.85 humidity 90.0 30 < th dose dependent rect. 6 1
298 164.91 wind 1.0 90 > th dose independent rect. 13 20
302 164.92 radiation 1.0 30 > th dose dependent rect. 6 1
312 164.98 atmosphere 1015.0 30 < th dose dependent rect. 6 1
315 165.01 wind 1.0 90 > th dose independent rect. 13 22
345 165.18 wind 1.0 30 > th dose dependent rect. 6 1
348 165.20 radiation 40.0 1440 < th dose independent rect. 7 1
356 165.24 humidity 90.0 90 < th dose independent rect. 4 3
357 165.25 temperature 25.0 10 < th dose independent rect. 24 12
365 165.28 temperature 25.0 720 > th dose independent rect. 1 1
382 165.29 wind 1.0 10 > th dose independent rect. 4 16
401 165.44 temperature 30.0 30 < th dose dependent rect. 6 1
420 165.55 wind 3.0 270 < th dose independent rect. 3 4
422 165.55 humidity 50.0 1440 > th dose independent rect. 5 5
425 165.56 humidity 50.0 90 > th dose independent rect. 1 12
426 165.56 humidity 50.0 30 > th dose independent rect. 7 23
454 165.74 temperature 25.0 10 < th dose independent rect. 24 9
470 165.81 wind 1.0 10 > th dose independent rect. 3 7
473 165.82 wind 1.0 90 > th dose independent rect. 3 6
485 165.90 temperature 25.0 10 < th dose independent sin 6 NA
489 165.94 humidity 80.0 270 > th dose independent rect. 3 4
523 166.11 atmosphere 1015.0 30 < th dose independent rect. 7 23
525 166.13 temperature 25.0 1440 < th dose independent rect. 3 1
528 166.14 humidity 90.0 10 < th dose independent rect. 4 1
533 166.15 temperature 25.0 10 > th dose independent sin 6 NA
536 166.17 wind 1.0 10 > th dose independent rect. 17 14
554 166.23 wind 9.0 1440 < th dose independent rect. 5 3
556 166.23 temperature 10.0 1440 > th dose independent rect. 5 3
559 166.23 temperature 30.0 1440 < th dose independent rect. 5 3
563 166.23 humidity 50.0 1440 > th dose independent rect. 5 3
568 166.23 atmosphere 995.0 1440 > th dose independent rect. 5 3
569 166.23 atmosphere 1015.0 1440 < th dose independent rect. 5 3
570 166.23 temperature 10.0 1440 > th dose independent rect. 8 21
584 166.32 radiation 10.0 270 < th dose independent rect. 3 4
591 166.35 wind 3.0 30 < th dose independent rect. 4 3
592 166.36 wind 1.0 270 > th dose independent rect. 4 1
607 166.41 precipitation 0.1 30 < th dose independent rect. 7 23
609 166.41 precipitation 0.1 30 < th dose dependent rect. 7 23
616 166.44 humidity 90.0 10 < th dose independent rect. 4 16
629 166.49 wind 1.0 30 > th dose dependent rect. 4 1
637 166.52 wind 7.0 270 < th dose dependent rect. 3 4
647 166.56 humidity 50.0 270 > th dose independent rect. 7 20
683 166.67 wind 1.0 10 > th dose independent rect. 21 23
688 166.68 radiation 10.0 30 < th dose independent rect. 4 4
720 166.73 humidity 50.0 720 > th dose independent rect. 7 6
723 166.73 atmosphere 995.0 30 > th dose independent rect. 7 23
742 166.79 humidity 90.0 10 < th dose independent rect. 4 14
761 166.86 humidity 80.0 4320 < th dose dependent rect. 3 1
771 166.91 wind 3.0 30 < th dose independent rect. 4 5
775 166.92 atmosphere 1015.0 270 < th dose independent rect. 7 20
777 166.93 precipitation 0.1 270 < th dose independent rect. 3 4
781 166.93 precipitation 0.1 270 < th dose dependent rect. 3 4
782 166.94 atmosphere 1005.0 270 > th dose dependent rect. 3 2
791 166.97 precipitation 0.1 270 < th dose independent rect. 7 20
794 166.97 precipitation 0.1 270 < th dose dependent rect. 7 20
800 166.99 humidity 80.0 10 > th dose independent rect. 4 3
811 167.00 atmosphere 1005.0 30 > th dose dependent rect. 4 3
820 167.02 radiation 1.0 90 > th dose dependent rect. 18 13
821 167.03 humidity 50.0 90 > th dose independent rect. 11 2
825 167.04 humidity 50.0 90 > th dose independent rect. 7 6
829 167.04 radiation 40.0 270 < th dose dependent rect. 3 4
838 167.06 wind 1.0 10 > th dose independent rect. 23 23
842 167.07 humidity 50.0 90 > th dose independent rect. 9 4
846 167.08 temperature 10.0 270 > th dose independent rect. 3 4
848 167.08 temperature 30.0 270 < th dose independent rect. 3 4
849 167.08 humidity 50.0 270 > th dose independent rect. 3 4
851 167.08 atmosphere 995.0 270 > th dose independent rect. 3 4
852 167.08 atmosphere 1015.0 270 < th dose independent rect. 3 4
854 167.08 temperature 20.0 270 > th dose independent rect. 3 13
855 167.08 temperature 10.0 270 > th dose independent rect. 7 20
863 167.11 temperature 30.0 720 < th dose dependent rect. 1 2
864 167.11 humidity 50.0 270 > th dose dependent rect. 3 4
873 167.13 radiation 10.0 30 < th dose independent rect. 4 10
892 167.17 wind 5.0 30 < th dose dependent rect. 4 3
928 167.23 radiation 1.0 90 > th dose independent rect. 11 2
930 167.23 precipitation 0.1 720 < th dose independent rect. 3 22
933 167.23 precipitation 0.1 720 < th dose dependent rect. 3 22
952 167.28 wind 3.0 10 > th dose independent rect. 2 11
953 167.29 wind 1.0 10 > th dose independent rect. 4 14
955 167.30 atmosphere 1000.0 90 > th dose independent rect. 13 18
956 167.30 wind 9.0 270 < th dose independent rect. 7 20
957 167.30 atmosphere 1000.0 30 > th dose independent rect. 7 21
960 167.30 atmosphere 1015.0 30 < th dose dependent rect. 4 3
962 167.31 humidity 80.0 4320 > th dose independent rect. 3 1
973 167.32 temperature 20.0 30 > th dose dependent rect. 20 8
976 167.33 humidity 90.0 10 < th dose independent rect. 4 12
977 167.33 atmosphere 995.0 270 > th dose independent rect. 7 20
978 167.34 temperature 25.0 720 > th dose independent rect. 16 1
987 167.36 precipitation 0.1 270 < th dose independent rect. 16 11
989 167.36 precipitation 0.1 270 < th dose dependent rect. 16 11
996 167.38 humidity 80.0 4320 < th dose independent rect. 3 1
1000 167.38 wind 1.0 10 > th dose independent rect. 23 11