Os03g0639100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0639100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.2 | 0.439 | 3.58 | -1.97 | 0.0193 | 119 | 0.275 | -307 | 0.0636 | 11.3 | 47 | 9 | -- | -- |
| 87.23 | 0.438 | 2.81 | 0.0408 | 0.0187 | 1.08 | 0.27 | -- | 0.0638 | 11.2 | 47 | 9 | -- | -- |
| 87.52 | 0.436 | 3.59 | -1.98 | 0.0206 | 119 | -- | -307 | 0.06 | 8.63 | 47 | 8 | -- | -- |
| 87.52 | 0.439 | 2.81 | 0.0491 | 0.0235 | 1.13 | -- | -- | 0.0646 | 8.23 | 44.17 | 6 | -- | -- |
| 87.54 | 0.436 | 3.58 | -1.96 | -- | 119 | -- | -307 | 0.0647 | -- | 46.99 | 8 | -- | -- |
| 90.54 | 0.446 | 2.81 | 0.0803 | 0.043 | -- | 0.404 | -- | 0.0593 | 11.5 | -- | -- | -- | -- |
| 91.23 | 0.447 | 2.81 | 0.0963 | 0.0432 | -- | -- | -- | 0.0606 | 10.4 | -- | -- | -- | -- |
| 87.55 | 0.438 | 2.81 | 0.049 | -- | 1.14 | -- | -- | 0.0649 | -- | 44.62 | 6 | -- | -- |
| 87.58 | 0.438 | 2.81 | -- | 0.0236 | 1.15 | -- | -- | 0.0593 | 8.02 | 44.17 | 6 | -- | -- |
| 91.35 | 0.447 | 2.81 | 0.0956 | -- | -- | -- | -- | 0.0605 | -- | -- | -- | -- | -- |
| 91.48 | 0.447 | 2.81 | -- | 0.0426 | -- | -- | -- | 0.0499 | 10.2 | -- | -- | -- | -- |
| 87.61 | 0.437 | 2.81 | -- | -- | 1.16 | -- | -- | 0.0596 | -- | 44.62 | 6 | -- | -- |
| 91.59 | 0.447 | 2.81 | -- | -- | -- | -- | -- | 0.0499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.25 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 6 | 84.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 9 | 84.34 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 13 | 84.34 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 19 | 84.34 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 20 | 84.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 41 | 84.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 44 | 84.35 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 45 | 84.36 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 48 | 84.36 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 90 | 84.39 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 94 | 84.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 109 | 84.43 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 114 | 84.46 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 116 | 84.47 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 117 | 84.47 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 132 | 84.48 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 150 | 84.50 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 151 | 84.50 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 156 | 84.51 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 158 | 84.51 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 159 | 84.51 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 163 | 84.51 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 165 | 84.51 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 170 | 84.51 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 171 | 84.51 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 172 | 84.51 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 177 | 84.51 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 178 | 84.52 | wind | 7.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 182 | 84.54 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 183 | 84.55 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 184 | 84.55 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 5 |
| 206 | 84.72 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 209 | 84.76 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 213 | 84.79 | wind | 5.0 | 10 | > th | dose independent | rect. | 12 | 2 |
| 226 | 84.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 287 | 85.23 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 381 | 85.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 382 | 85.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 384 | 85.29 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 385 | 85.29 | wind | 3.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 420 | 85.46 | atmosphere | 1010.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 440 | 85.50 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 841 | 86.12 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 878 | 86.20 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 880 | 86.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 881 | 86.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 884 | 86.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 888 | 86.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 897 | 86.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 898 | 86.22 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 919 | 86.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 947 | 86.25 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 960 | 86.27 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 3 |
| 971 | 86.32 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 975 | 86.33 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 6 |
| 980 | 86.34 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 982 | 86.34 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 988 | 86.42 | atmosphere | 1010.0 | 720 | > th | dose independent | rect. | 3 | 1 |