Os03g0637800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os03g0637800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 372.75 | 0.907 | 6.42 | -3.9 | 2.01 | -1.92 | 1.12 | -1.09 | -1.46 | 8.06 | 73 | 1311 | -- | -- |
| 375.28 | 0.902 | 6.44 | -4.06 | 2.02 | -1.97 | 1.11 | -- | -1.51 | 8.07 | 73 | 1302 | -- | -- |
| 376.4 | 0.904 | 6.42 | -3.88 | 2.02 | -1.92 | -- | -1.02 | -1.47 | 8.07 | 73.05 | 1303 | -- | -- |
| 378.75 | 0.906 | 6.44 | -4.03 | 2.02 | -1.96 | -- | -- | -1.51 | 8.06 | 73.12 | 1303 | -- | -- |
| 590.12 | 1.13 | 6.47 | -3.82 | -- | -1.88 | -- | -1.15 | -1.43 | -- | 73.51 | 1379 | -- | -- |
| 509.66 | 1.06 | 6.38 | -3.7 | 2.02 | -- | 0.961 | -- | -1.24 | 7.46 | -- | -- | -- | -- |
| 512.21 | 1.06 | 6.38 | -3.67 | 2.02 | -- | -- | -- | -1.24 | 7.46 | -- | -- | -- | -- |
| 593.03 | 1.13 | 6.49 | -4 | -- | -1.94 | -- | -- | -1.48 | -- | 73.15 | 1368 | -- | -- |
| 715.28 | 1.25 | 6.33 | -- | 2.35 | -3.18 | -- | -- | -1.25 | 7.34 | 87 | 1926 | -- | -- |
| 730.36 | 1.26 | 6.43 | -3.64 | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
| 868.08 | 1.38 | 6.29 | -- | 1.99 | -- | -- | -- | -0.831 | 7.59 | -- | -- | -- | -- |
| 956.15 | 1.44 | 6.52 | -- | -- | -2.67 | -- | -- | -1.61 | -- | 85.12 | 2788 | -- | -- |
| 1080.46 | 1.53 | 6.34 | -- | -- | -- | -- | -- | -0.803 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 377.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 6 | 378.53 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 18 |
| 35 | 379.98 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 40 | 380.21 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 61 | 380.67 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 63 | 380.81 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 64 | 380.81 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 69 | 380.85 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 81 | 380.98 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 84 | 381.06 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 89 | 381.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 10 |
| 97 | 381.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 15 |
| 101 | 381.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 104 | 381.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 148 | 381.85 | humidity | 60 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 164 | 382.15 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 231 | 382.75 | humidity | 60 | 1440 | > th | dose dependent | sin | 17 | NA |
| 256 | 383.06 | humidity | 50 | 1440 | > th | dose dependent | sin | 15 | NA |
| 278 | 383.38 | temperature | 30 | 14400 | < th | dose independent | sin | 8 | NA |
| 303 | 383.76 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 19 |
| 306 | 383.76 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 326 | 383.90 | temperature | 30 | 14400 | > th | dose independent | sin | 8 | NA |
| 347 | 384.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 357 | 384.29 | humidity | 90 | 1440 | < th | dose dependent | sin | 14 | NA |
| 433 | 384.72 | temperature | 30 | 14400 | > th | dose dependent | sin | 7 | NA |
| 464 | 384.87 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 486 | 384.92 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 498 | 384.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 499 | 384.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 522 | 385.20 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 529 | 385.26 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 551 | 385.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 554 | 385.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 577 | 385.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 593 | 385.48 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 685 | 386.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 719 | 386.17 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 874 | 386.37 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 953 | 386.97 | humidity | 70 | 1440 | < th | dose independent | sin | 19 | NA |
| 969 | 387.00 | humidity | 70 | 1440 | > th | dose independent | sin | 19 | NA |
| 978 | 387.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 17 |