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Os03g0634400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.78 (0.0393) R2 : 0.931
β1 : 0.107 (0.144) R2dD : 0.000135 R2D : -0.00229
β2 : 3.02 (0.135) R2dC : 0.138 R2C : 0.471
β3 : -4.73 (0.12) R2dE : 0.439 R2E : 0.776
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 3.18 (0.343) R2dD*E : 0.0139 R2D*E : 0.0026
γ1 : 0.591 (0.084) R2dN8 : 0.00955 R2N8 : 0.0101
σ : 0.734
deviance : 248.3
__
_____
C
peak time of C : 15.5
E
wheather : humidity
threshold : 45.68
memory length : 104
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.6
open length of G : 11

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
249.32 0.742 8.75 0.135 3.07 -4.54 1.42 4.21 0.637 15.3 50.67 88 17.8 11
292.73 0.797 8.71 0.366 3.02 -4.46 -1.02 -- 0.741 14.9 51.84 99 17.5 11.3
248.3 0.734 8.78 0.107 3.02 -4.73 -- 3.18 0.591 15.5 45.68 104 17.6 11
295.8 0.801 8.78 0.0968 2.82 -4.81 -- -- 0.534 15.7 39.19 110 17.6 11
406.92 0.94 8.65 0.887 -- -5.88 -- 3.55 1.15 -- 24.76 169 18.3 10.7
518.54 1.07 8.65 0.117 7.04 -- -2.47 -- 0.825 13.7 -- -- -- --
542.44 1.09 8.66 0.0388 7.05 -- -- -- 0.811 13.7 -- -- -- --
357.1 0.88 8.76 0.151 -- -6.71 -- -- 0.579 -- 23.86 235 17.6 10.7
295.74 0.801 8.79 -- 2.76 -4.86 -- -- 0.548 15.8 37.28 113 17.6 11.1
3561.4 2.79 8.74 -0.248 -- -- -- -- 0.653 -- -- -- -- --
542.48 1.09 8.66 -- 7.05 -- -- -- 0.807 13.7 -- -- -- --
357.16 0.88 8.76 -- -- -6.7 -- -- 0.578 -- 22.08 238 17.6 10.8
3563.03 2.79 8.74 -- -- -- -- -- 0.68 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 269.38 humidity 50.0 90 > th dose dependent rect. 18 11
2 270.21 radiation 1.0 90 < th dose dependent rect. 17 12
3 273.90 radiation 1.0 90 < th dose dependent rect. 15 14
12 282.49 radiation 1.0 90 < th dose independent rect. 17 12
19 286.35 radiation 1.0 90 < th dose independent rect. 15 14
28 292.25 humidity 70.0 90 > th dose independent rect. 19 10
29 292.33 radiation 1.0 90 < th dose dependent rect. 19 10
32 292.69 wind 7.0 90 < th dose independent rect. 19 10
33 292.90 precipitation 0.1 90 < th dose independent rect. 5 14
34 292.90 precipitation 0.1 90 < th dose dependent rect. 5 14
38 294.82 radiation 1.0 90 < th dose independent rect. 19 10
47 296.29 temperature 10.0 90 > th dose independent rect. 19 10
48 296.29 temperature 30.0 90 < th dose independent rect. 19 10
49 296.29 humidity 50.0 90 > th dose independent rect. 19 10
51 296.29 atmosphere 995.0 90 > th dose independent rect. 19 10
55 296.29 temperature 10.0 90 > th dose independent rect. 5 14
56 296.29 atmosphere 1015.0 90 < th dose independent rect. 5 14
63 298.06 wind 9.0 90 < th dose dependent rect. 19 10
64 298.42 radiation 40.0 270 < th dose dependent rect. 5 1
67 298.80 wind 7.0 270 < th dose independent rect. 5 1
69 298.80 temperature 10.0 270 > th dose independent rect. 5 1
71 298.80 temperature 30.0 270 < th dose independent rect. 5 1
72 298.80 humidity 50.0 270 > th dose independent rect. 5 1
75 298.80 atmosphere 995.0 270 > th dose independent rect. 5 1
76 298.80 atmosphere 1015.0 270 < th dose independent rect. 5 1
77 298.80 radiation 20.0 270 < th dose independent rect. 5 1
80 298.80 temperature 10.0 270 > th dose independent rect. 6 23
81 299.12 precipitation 0.1 270 < th dose independent rect. 5 1
82 299.12 precipitation 0.1 270 < th dose dependent rect. 5 1
85 299.71 wind 9.0 90 < th dose independent rect. 5 14
88 300.99 humidity 50.0 270 > th dose dependent rect. 5 1
95 303.92 wind 9.0 270 < th dose dependent rect. 5 1
96 304.13 humidity 50.0 270 > th dose independent rect. 17 11
100 305.30 precipitation 0.1 90 < th dose independent rect. 19 10
101 305.30 precipitation 0.1 90 < th dose dependent rect. 19 10
102 305.76 radiation 1.0 90 < th dose dependent sin 11 NA
105 306.15 temperature 10.0 1440 > th dose independent rect. 20 10
108 306.15 temperature 30.0 1440 < th dose independent rect. 20 10
112 306.15 humidity 50.0 1440 > th dose independent rect. 20 10
118 306.15 atmosphere 995.0 1440 > th dose independent rect. 20 10
119 306.15 radiation 20.0 1440 < th dose independent rect. 20 10
128 306.15 temperature 10.0 1440 > th dose independent rect. 6 14
146 308.95 humidity 50.0 90 > th dose dependent rect. 5 4
147 308.98 atmosphere 995.0 270 > th dose independent rect. 17 11
149 309.68 wind 9.0 270 < th dose independent rect. 17 11
151 310.05 radiation 40.0 90 < th dose dependent rect. 5 4
153 310.79 precipitation 0.1 270 < th dose independent rect. 13 10
154 310.79 precipitation 0.1 270 < th dose dependent rect. 13 10
156 311.15 temperature 10.0 270 > th dose independent rect. 17 11
163 311.38 radiation 40.0 90 < th dose dependent rect. 5 6
172 314.28 atmosphere 1010.0 90 < th dose independent rect. 5 4
174 314.40 wind 9.0 90 < th dose independent rect. 5 4
175 314.40 temperature 10.0 90 > th dose independent rect. 5 4
177 314.40 humidity 50.0 90 > th dose independent rect. 5 4
178 314.40 atmosphere 995.0 90 > th dose independent rect. 5 4
180 314.40 temperature 10.0 90 > th dose independent rect. 9 20
182 314.65 temperature 30.0 90 < th dose independent rect. 5 4
184 314.71 precipitation 0.1 90 < th dose independent rect. 5 4
185 314.71 precipitation 0.1 90 < th dose dependent rect. 5 4
189 315.58 wind 9.0 90 < th dose dependent rect. 5 4
190 316.05 atmosphere 995.0 90 > th dose independent rect. 9 20
191 316.16 radiation 40.0 90 < th dose independent rect. 5 4
192 316.24 wind 9.0 90 < th dose independent rect. 9 20
204 318.50 precipitation 0.1 270 < th dose independent rect. 23 14
205 318.50 precipitation 0.1 270 < th dose dependent rect. 23 14
206 318.58 radiation 1.0 90 < th dose independent sin 11 NA
209 318.91 humidity 50.0 90 > th dose dependent rect. 5 6
211 319.14 temperature 30.0 270 < th dose dependent rect. 5 1
215 319.46 radiation 20.0 90 < th dose independent rect. 5 4
218 319.60 temperature 10.0 270 > th dose dependent rect. 13 11
229 321.74 radiation 1.0 90 < th dose dependent sin 9 NA
236 322.38 wind 9.0 270 < th dose independent rect. 23 14
237 322.66 atmosphere 995.0 90 > th dose independent rect. 5 14
238 322.73 temperature 10.0 270 > th dose independent rect. 13 10
239 322.73 temperature 10.0 270 > th dose independent rect. 23 14
240 322.73 atmosphere 995.0 270 > th dose independent rect. 23 14
242 322.94 temperature 10.0 270 > th dose dependent rect. 5 1
243 323.00 wind 1.0 270 > th dose independent rect. 4 2
247 323.39 wind 9.0 270 < th dose independent rect. 6 23
253 324.24 temperature 10.0 1440 > th dose independent rect. 6 4
256 324.24 atmosphere 995.0 1440 > th dose independent rect. 6 4
257 324.24 atmosphere 1015.0 1440 < th dose independent rect. 6 4
258 324.24 temperature 10.0 1440 > th dose independent rect. 10 20
270 325.02 humidity 50.0 90 > th dose independent rect. 9 20
272 325.10 humidity 50.0 270 > th dose independent rect. 7 21
276 326.13 atmosphere 1015.0 270 < th dose independent rect. 23 14
277 326.15 temperature 30.0 90 < th dose dependent rect. 5 4
281 326.42 precipitation 0.1 90 < th dose independent rect. 9 20
282 326.42 precipitation 0.1 90 < th dose dependent rect. 9 20
292 327.49 wind 9.0 270 < th dose independent rect. 13 10
296 327.68 temperature 10.0 720 > th dose dependent rect. 13 3
308 328.09 temperature 10.0 270 > th dose independent rect. 7 21
325 329.29 precipitation 0.1 270 < th dose independent rect. 6 23
326 329.29 precipitation 0.1 270 < th dose dependent rect. 6 23
328 329.50 radiation 1.0 90 > th dose independent sin 11 NA
334 329.71 precipitation 0.1 270 < th dose independent rect. 17 11
335 329.71 precipitation 0.1 270 < th dose dependent rect. 17 11
338 330.07 radiation 20.0 90 < th dose independent rect. 5 6
349 330.75 atmosphere 995.0 270 > th dose independent rect. 7 21
380 331.92 atmosphere 1015.0 90 < th dose independent rect. 9 20
398 332.01 wind 9.0 270 < th dose independent rect. 7 21
409 332.27 wind 9.0 1440 < th dose independent rect. 6 3
413 332.27 humidity 50.0 1440 > th dose independent rect. 6 3
426 332.53 atmosphere 995.0 270 > th dose dependent rect. 5 1
428 333.06 wind 1.0 270 > th dose independent rect. 13 10
434 333.69 wind 1.0 90 > th dose independent rect. 4 5
438 333.72 humidity 60.0 30 > th dose dependent rect. 12 17
445 334.09 atmosphere 1015.0 270 < th dose dependent rect. 5 1
487 335.62 atmosphere 1015.0 90 < th dose dependent rect. 5 4
518 336.57 atmosphere 1015.0 90 < th dose independent rect. 19 10
558 337.80 precipitation 0.1 270 < th dose independent rect. 7 21
559 337.80 precipitation 0.1 270 < th dose dependent rect. 7 21
562 337.97 humidity 50.0 270 > th dose independent rect. 23 14
576 338.73 atmosphere 995.0 270 > th dose independent rect. 6 23
577 338.83 radiation 40.0 90 < th dose independent rect. 5 20
717 344.12 wind 9.0 30 < th dose dependent rect. 10 19
778 346.31 temperature 10.0 90 > th dose dependent rect. 5 4
800 346.75 radiation 40.0 30 < th dose dependent rect. 5 21
930 348.81 radiation 1.0 90 > th dose independent rect. 17 16
940 348.97 temperature 30.0 90 < th dose independent rect. 9 20