Os03g0624300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0624300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 623.51 | 1.17 | 9.31 | -3.64 | 2.46 | -1.05 | 1.89 | -19.4 | 1.1 | 20.1 | 19.46 | 5519 | 16.1 | -- |
| 818.64 | 1.33 | 8.73 | 0.594 | 2.21 | -1.9 | -0.211 | -- | 1.49 | 20.7 | 30.76 | 1281 | 17.9 | -- |
| 630.61 | 1.17 | 9.31 | -3.67 | 2.42 | -1.04 | -- | -19 | 1.1 | 20.1 | 19.18 | 5636 | 15.2 | -- |
| 772.36 | 1.29 | 8.66 | 1.2 | 2.49 | -2.31 | -- | -- | 1.94 | 20.1 | 32.8 | 1533 | 1.91 | -- |
| 944.17 | 1.43 | 9.14 | -2.83 | -- | -1.61 | -- | -17.7 | 1.26 | -- | 14.15 | 5591 | 12.6 | -- |
| 955.32 | 1.45 | 8.55 | 0.758 | 2.44 | -- | 1.47 | -- | 2.31 | 19.7 | -- | -- | -- | -- |
| 961.47 | 1.45 | 8.54 | 0.719 | 2.44 | -- | -- | -- | 2.31 | 19.7 | -- | -- | -- | -- |
| 1103.01 | 1.55 | 8.57 | 1.18 | -- | -2.31 | -- | -- | 1.92 | -- | 32.76 | 1534 | 1.96 | -- |
| 810.58 | 1.33 | 8.65 | -- | 2.45 | -2.21 | -- | -- | 1.86 | 20.1 | 32.8 | 1535 | 2.07 | -- |
| 1282.56 | 1.67 | 8.48 | 0.689 | -- | -- | -- | -- | 2.28 | -- | -- | -- | -- | -- |
| 975.11 | 1.46 | 8.56 | -- | 2.43 | -- | -- | -- | 2.23 | 19.8 | -- | -- | -- | -- |
| 1139.38 | 1.57 | 8.58 | -- | -- | -2.13 | -- | -- | 1.83 | -- | 32.8 | 1534 | 2.02 | -- |
| 1295.07 | 1.68 | 8.5 | -- | -- | -- | -- | -- | 2.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 628.60 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 2 | 629.39 | wind | 5 | 43200 | < th | dose independent | sin | 9 | NA |
| 6 | 630.20 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 8 | 630.72 | wind | 5 | 43200 | > th | dose independent | sin | 9 | NA |
| 12 | 631.16 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 13 | 631.29 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 27 | 632.36 | wind | 5 | 43200 | > th | dose dependent | sin | 9 | NA |
| 65 | 635.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 106 | 639.38 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 112 | 639.80 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 150 | 642.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 151 | 642.42 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 164 | 643.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 12 |
| 202 | 644.48 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 203 | 644.49 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 209 | 644.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 236 | 645.62 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 277 | 646.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 289 | 646.96 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 323 | 647.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 366 | 648.08 | temperature | 20 | 4320 | > th | dose dependent | sin | 23 | NA |
| 367 | 648.09 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 407 | 648.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 422 | 649.02 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 486 | 649.90 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 502 | 650.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 514 | 650.23 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 521 | 650.33 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 699 | 652.45 | temperature | 10 | 14400 | > th | dose dependent | sin | 17 | NA |
| 713 | 652.55 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 729 | 652.68 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 772 | 653.25 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 841 | 653.77 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 981 | 654.72 | temperature | 30 | 14400 | < th | dose dependent | sin | 16 | NA |
| 998 | 654.81 | temperature | 20 | 14400 | > th | dose independent | sin | 12 | NA |