Os03g0623100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0623100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.69 | 0.252 | 2.99 | 0.242 | 0.105 | -8.27 | 0.208 | 22.3 | -0.0345 | 11.9 | 44.31 | 218 | -- | -- |
| 29.93 | 0.257 | 3.05 | 0.139 | 0.111 | 0.0562 | 0.248 | -- | -0.0364 | 12.7 | 44.31 | 218 | -- | -- |
| 28.65 | 0.249 | 2.99 | 0.261 | 0.102 | -8.89 | -- | 24.3 | -0.0336 | 12 | 43.48 | 174 | -- | -- |
| 28.81 | 0.25 | 3.04 | 0.121 | 0.101 | 0.993 | -- | -- | -0.0338 | 12.3 | 44.85 | 175 | -- | -- |
| 29.28 | 0.252 | 2.99 | 0.265 | -- | -9.24 | -- | 25.3 | -0.0351 | -- | 43 | 173 | -- | -- |
| 29.93 | 0.256 | 3.05 | 0.141 | 0.112 | -- | 0.255 | -- | -0.0367 | 12.7 | -- | -- | -- | -- |
| 30.21 | 0.257 | 3.05 | 0.151 | 0.112 | -- | -- | -- | -0.0355 | 12.5 | -- | -- | -- | -- |
| 29.41 | 0.253 | 3.05 | 0.109 | -- | 1.07 | -- | -- | -0.0342 | -- | 44.69 | 175 | -- | -- |
| 29.13 | 0.251 | 3.05 | -- | 0.0959 | 1.09 | -- | -- | -0.0464 | 11.9 | 45 | 175 | -- | -- |
| 30.99 | 0.26 | 3.05 | 0.147 | -- | -- | -- | -- | -0.0373 | -- | -- | -- | -- | -- |
| 30.81 | 0.26 | 3.05 | -- | 0.109 | -- | -- | -- | -0.0522 | 12.4 | -- | -- | -- | -- |
| 29.72 | 0.254 | 3.05 | -- | -- | 1.14 | -- | -- | -0.0458 | -- | 44.5 | 175 | -- | -- |
| 31.56 | 0.262 | 3.05 | -- | -- | -- | -- | -- | -0.0536 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.92 | wind | 1 | 10 | < th | dose independent | rect. | 14 | 2 |
| 3 | 24.92 | wind | 1 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 47 | 25.66 | wind | 1 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 55 | 25.72 | wind | 1 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 143 | 26.43 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 326 | 26.85 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 354 | 27.10 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 368 | 27.18 | wind | 1 | 30 | < th | dose dependent | sin | 22 | NA |
| 453 | 27.58 | radiation | 20 | 90 | > th | dose independent | rect. | 12 | 21 |
| 470 | 27.62 | radiation | 30 | 270 | > th | dose independent | rect. | 12 | 2 |
| 480 | 27.64 | humidity | 50 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 483 | 27.65 | radiation | 20 | 90 | > th | dose independent | rect. | 12 | 19 |
| 485 | 27.66 | radiation | 20 | 90 | > th | dose independent | rect. | 12 | 5 |
| 501 | 27.67 | humidity | 50 | 10 | < th | dose independent | rect. | 15 | 1 |
| 526 | 27.76 | radiation | 20 | 90 | < th | dose independent | sin | 14 | NA |
| 549 | 27.79 | wind | 7 | 30 | > th | dose dependent | rect. | 3 | 7 |
| 566 | 27.88 | radiation | 20 | 90 | > th | dose independent | sin | 14 | NA |
| 625 | 28.04 | wind | 1 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 626 | 28.06 | wind | 7 | 30 | > th | dose independent | rect. | 3 | 8 |
| 628 | 28.06 | wind | 1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 650 | 28.10 | wind | 9 | 10 | > th | dose independent | rect. | 21 | 14 |
| 662 | 28.11 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 676 | 28.11 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 697 | 28.12 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 702 | 28.12 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 719 | 28.14 | radiation | 10 | 90 | > th | dose dependent | sin | 13 | NA |
| 735 | 28.16 | radiation | 10 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 847 | 28.22 | wind | 3 | 90 | > th | dose independent | rect. | 3 | 1 |