Os03g0621400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os03g0621400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.71 | 0.748 | 5.36 | 3.22 | 1.7 | 5.28 | 1.37 | -22.3 | 0.473 | 16.7 | 89.84 | 31 | 1.98 | 3 |
| 280.72 | 0.78 | 5.38 | 3.21 | 1.71 | 2.22 | 1.57 | -- | 0.443 | 16.6 | 87.72 | 135 | 1.7 | 3.06 |
| 258.42 | 0.749 | 5.36 | 3.23 | 1.71 | 5.37 | -- | -23.5 | 0.478 | 16.7 | 90 | 31 | 1.99 | 3.02 |
| 288 | 0.79 | 5.35 | 3.22 | 1.68 | 2.28 | -- | -- | 0.48 | 16.7 | 88.93 | 173 | 1.78 | 1.33 |
| 409.84 | 0.943 | 5.34 | 3.16 | -- | 4.82 | -- | -25.3 | 0.435 | -- | 88.47 | 35 | 2.2 | 3.23 |
| 287.12 | 0.794 | 5.36 | 3.19 | 1.62 | -- | 1.95 | -- | 0.443 | 16.7 | -- | -- | -- | -- |
| 297.05 | 0.807 | 5.36 | 3.2 | 1.64 | -- | -- | -- | 0.453 | 16.8 | -- | -- | -- | -- |
| 436.02 | 0.973 | 5.33 | 3.15 | -- | 1.58 | -- | -- | 0.415 | -- | 87 | 154 | 2.02 | 1.18 |
| 559.83 | 1.1 | 5.43 | -- | 1.63 | 2.29 | -- | -- | 0.12 | 16.8 | 87 | 123 | 2.27 | 0.836 |
| 439.01 | 0.979 | 5.34 | 3.14 | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
| 567.63 | 1.11 | 5.44 | -- | 1.58 | -- | -- | -- | 0.0959 | 16.8 | -- | -- | -- | -- |
| 696.52 | 1.23 | 5.42 | -- | -- | 1.62 | -- | -- | 0.0746 | -- | 85 | 186 | 2.22 | 0.199 |
| 699.5 | 1.23 | 5.42 | -- | -- | -- | -- | -- | 0.0615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 253.72 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 3 | 254.02 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 6 | 254.04 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 11 | 254.17 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 12 | 254.20 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 15 | 254.25 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 16 | 254.25 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 18 | 254.28 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 5 |
| 45 | 259.06 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 46 | 259.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 47 | 259.18 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 52 | 259.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 16 |
| 63 | 261.34 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 73 | 261.66 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 77 | 261.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 80 | 261.97 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 84 | 262.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 88 | 262.18 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 95 | 262.33 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 139 | 263.49 | temperature | 25.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 182 | 264.24 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 6 |
| 195 | 264.44 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 8 |
| 206 | 264.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 20 | 9 |
| 212 | 264.71 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 224 | 264.87 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 238 | 264.98 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 239 | 264.98 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 246 | 265.06 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 266 | 265.31 | temperature | 30.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 286 | 265.57 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 293 | 265.67 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 298 | 265.67 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 304 | 265.68 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 348 | 266.25 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 350 | 266.27 | temperature | 25.0 | 270 | < th | dose independent | sin | 3 | NA |
| 355 | 266.30 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 367 | 266.35 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 417 | 266.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 482 | 267.24 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 20 | 19 |
| 519 | 267.45 | temperature | 25.0 | 270 | > th | dose independent | sin | 3 | NA |
| 533 | 267.50 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 672 | 268.22 | temperature | 25.0 | 90 | > th | dose independent | sin | 1 | NA |
| 720 | 268.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 737 | 268.55 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 797 | 268.82 | temperature | 10.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 802 | 268.85 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 5 |
| 844 | 268.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 873 | 269.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 23 |
| 894 | 269.19 | temperature | 10.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 922 | 269.29 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 938 | 269.35 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 4 |
| 942 | 269.36 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 953 | 269.41 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 17 |