Os03g0620800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SEC1-family transport protein SLY1 (AtSLY1).
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Os03g0620800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SEC1-family transport protein SLY1 (AtSLY1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.39 | 0.217 | 12.3 | 0.887 | 0.398 | 0.705 | -0.147 | -1.04 | 0.393 | 21.3 | 94.16 | 261 | -- | -- |
| 21.9 | 0.218 | 12.3 | 0.892 | 0.394 | 0.834 | -0.0425 | -- | 0.387 | 21.3 | 94.53 | 238 | -- | -- |
| 21.4 | 0.215 | 12.4 | 0.889 | 0.393 | 0.717 | -- | -1.04 | 0.387 | 21.3 | 94.27 | 233 | -- | -- |
| 21.91 | 0.218 | 12.3 | 0.888 | 0.399 | 0.851 | -- | -- | 0.388 | 21.3 | 94.54 | 238 | -- | -- |
| 29.85 | 0.254 | 12.3 | 0.894 | -- | 0.524 | -- | -1.35 | 0.369 | -- | 94.51 | 197 | -- | -- |
| 24.96 | 0.234 | 12.4 | 0.898 | 0.347 | -- | -0.0822 | -- | 0.347 | 22.3 | -- | -- | -- | -- |
| 24.98 | 0.234 | 12.4 | 0.901 | 0.347 | -- | -- | -- | 0.348 | 22.3 | -- | -- | -- | -- |
| 30.52 | 0.257 | 12.3 | 0.901 | -- | 0.662 | -- | -- | 0.369 | -- | 94.84 | 175 | -- | -- |
| 42.4 | 0.303 | 12.3 | -- | 0.45 | 0.76 | -- | -- | 0.333 | 21 | 93.62 | 276 | -- | -- |
| 32.32 | 0.266 | 12.3 | 0.906 | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
| 46.37 | 0.319 | 12.4 | -- | 0.352 | -- | -- | -- | 0.247 | 22.5 | -- | -- | -- | -- |
| 49.89 | 0.33 | 12.4 | -- | -- | 0.318 | -- | -- | 0.309 | -- | 89.46 | 163 | -- | -- |
| 53.98 | 0.343 | 12.4 | -- | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.11 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 10 | 21.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 11 | 21.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 14 | 21.70 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 29 | 21.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 35 | 21.84 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 37 | 21.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 39 | 21.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 63 | 22.00 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 155 | 22.25 | humidity | 90.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 159 | 22.27 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 190 | 22.37 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 198 | 22.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 199 | 22.41 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 201 | 22.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 207 | 22.43 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 210 | 22.43 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 224 | 22.43 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 276 | 22.51 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 288 | 22.53 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 300 | 22.55 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 314 | 22.58 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 318 | 22.60 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 328 | 22.62 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 343 | 22.65 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 345 | 22.65 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 351 | 22.66 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 383 | 22.69 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 387 | 22.70 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 20 |
| 388 | 22.70 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 21 |
| 412 | 22.72 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 426 | 22.73 | humidity | 90.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 427 | 22.73 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 512 | 22.79 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 22 |
| 516 | 22.80 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 526 | 22.80 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 537 | 22.81 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 543 | 22.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 555 | 22.82 | humidity | 90.0 | 270 | > th | dose independent | sin | 9 | NA |
| 560 | 22.82 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 570 | 22.82 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 572 | 22.83 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 573 | 22.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 590 | 22.84 | wind | 7.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 599 | 22.84 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 604 | 22.84 | wind | 7.0 | 720 | < th | dose independent | rect. | 14 | 14 |
| 609 | 22.84 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 617 | 22.85 | wind | 7.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 618 | 22.85 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 623 | 22.85 | wind | 7.0 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 640 | 22.86 | wind | 7.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 647 | 22.86 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 17 | 13 |
| 650 | 22.86 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 663 | 22.87 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 667 | 22.87 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 12 |
| 687 | 22.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 690 | 22.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 692 | 22.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 719 | 22.89 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 736 | 22.90 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 750 | 22.90 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 754 | 22.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 755 | 22.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 8 |
| 774 | 22.91 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 17 |
| 798 | 22.92 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 836 | 22.93 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 853 | 22.94 | humidity | 90.0 | 30 | > th | dose dependent | sin | 4 | NA |
| 860 | 22.94 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 924 | 22.96 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 926 | 22.96 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 929 | 22.97 | humidity | 90.0 | 270 | < th | dose independent | sin | 8 | NA |
| 937 | 22.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 953 | 22.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 963 | 22.97 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 996 | 22.98 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 5 | 2 |