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Os03g0618800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0161) R2 : 0.398
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.64 (0.0384) R2dC : 0.368 R2C : 0.362
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.154 (0.0339) R2dN8 : 0.0354 R2N8 : 0.0297
σ : 0.304
deviance : 42.18
__
_____
C
peak time of C : 0.468
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.56 0.264 12.2 -0.294 0.612 -0.547 0.0663 0.833 0.00688 0.524 19.1 2107 -- --
32.13 0.264 12.2 -0.27 0.617 -0.837 0.0875 -- 0.00961 0.202 18.68 2749 -- --
31.58 0.262 12.2 -0.294 0.612 -0.548 -- 0.822 0.00725 0.524 19.1 2107 -- --
32.11 0.264 12.2 -0.255 0.614 -0.821 -- -- 0.0144 0.27 18.6 2750 -- --
53.95 0.342 12.3 -0.328 -- -0.629 -- 0.876 -0.0331 -- 18.9 2397 -- --
41.71 0.303 12.2 0.134 0.638 -- 0.00481 -- 0.169 0.457 -- -- -- --
41.71 0.302 12.2 0.134 0.638 -- -- -- 0.169 0.457 -- -- -- --
53.74 0.341 12.2 -0.273 -- -0.904 -- -- 0.0161 -- 18.6 2386 -- --
33.1 0.268 12.2 -- 0.624 -0.781 -- -- 0.0753 0.477 18.5 1963 -- --
67.29 0.383 12.2 0.156 -- -- -- -- 0.18 -- -- -- -- --
42.18 0.304 12.2 -- 0.64 -- -- -- 0.154 0.468 -- -- -- --
55.28 0.346 12.2 -- -- -0.759 -- -- 0.0593 -- 18.67 2385 -- --
67.93 0.385 12.2 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.63 wind 9 43200 > th dose dependent rect. 10 20
2 30.64 wind 9 43200 > th dose independent rect. 14 23
3 30.64 wind 9 43200 > th dose dependent rect. 10 16
5 30.65 wind 9 43200 < th dose independent rect. 15 21
10 30.65 wind 9 43200 > th dose dependent rect. 10 14
23 30.71 wind 9 43200 > th dose independent rect. 17 22
30 30.73 wind 7 43200 > th dose dependent rect. 15 22
34 30.75 wind 9 43200 > th dose dependent rect. 10 8
38 30.79 wind 9 43200 < th dose independent rect. 20 19
42 30.80 wind 9 43200 > th dose independent rect. 20 22
44 30.81 wind 9 43200 < th dose independent rect. 20 22
48 30.81 wind 9 43200 > th dose dependent sin 19 NA
50 30.82 wind 9 43200 > th dose independent rect. 10 2
55 30.83 wind 9 43200 < th dose independent rect. 10 2
56 30.83 wind 9 43200 > th dose independent rect. 20 19
68 30.86 wind 7 43200 > th dose dependent rect. 20 20
75 30.87 wind 9 43200 > th dose dependent rect. 14 18
86 30.89 wind 9 43200 < th dose independent no NA NA
88 30.89 wind 9 43200 > th dose independent rect. 4 22
89 30.89 wind 9 43200 < th dose independent rect. 3 22
92 30.89 wind 9 43200 > th dose independent rect. 1 23
97 30.89 wind 9 43200 < th dose independent rect. 1 23
106 30.90 wind 9 43200 > th dose independent no NA NA
108 30.90 wind 9 43200 > th dose independent rect. 4 20
109 30.90 wind 9 43200 < th dose independent rect. 4 20
125 30.90 wind 9 43200 > th dose independent rect. 6 23
128 30.90 wind 9 43200 < th dose independent rect. 22 23
146 30.91 wind 9 43200 > th dose independent rect. 22 23
166 30.94 wind 9 43200 < th dose independent sin 12 NA
177 30.96 wind 9 43200 > th dose independent sin 12 NA
189 30.97 wind 9 43200 < th dose independent rect. 7 8
197 30.97 wind 7 43200 > th dose dependent sin 12 NA
198 30.97 wind 7 43200 > th dose dependent rect. 9 5
200 30.97 wind 7 43200 > th dose dependent rect. 16 17
209 30.98 wind 7 43200 > th dose dependent rect. 8 7
214 30.99 wind 9 43200 < th dose independent sin 2 NA
228 30.99 wind 7 43200 > th dose dependent sin 2 NA
244 31.00 wind 7 43200 > th dose dependent no NA NA
245 31.00 wind 7 43200 > th dose dependent rect. 1 23
247 31.00 wind 7 43200 > th dose dependent rect. 4 23
267 31.01 wind 7 43200 > th dose dependent rect. 6 23
279 31.02 wind 7 43200 > th dose dependent rect. 23 23
310 31.05 wind 9 43200 > th dose independent rect. 7 8
312 31.05 wind 7 43200 < th dose independent rect. 17 15
328 31.06 wind 9 43200 > th dose independent sin 2 NA
336 31.06 wind 9 43200 > th dose independent rect. 10 23
356 31.07 wind 9 43200 < th dose independent rect. 10 23
367 31.08 wind 7 43200 > th dose independent rect. 17 15
396 31.10 wind 9 43200 < th dose independent rect. 2 16
397 31.10 wind 9 43200 > th dose independent rect. 1 17
428 31.12 wind 9 43200 > th dose independent rect. 4 14
484 31.15 wind 7 43200 > th dose dependent rect. 10 2
533 31.18 atmosphere 995 43200 < th dose dependent rect. 11 15
538 31.19 wind 9 43200 < th dose independent rect. 9 4
563 31.20 atmosphere 995 43200 < th dose dependent rect. 10 17
628 31.24 wind 3 43200 > th dose dependent rect. 4 11
667 31.27 wind 3 43200 > th dose dependent sin 3 NA
668 31.27 wind 1 43200 > th dose dependent rect. 5 9
696 31.29 wind 3 43200 > th dose dependent rect. 22 18
722 31.32 atmosphere 995 43200 < th dose independent rect. 1 14
747 31.34 temperature 20 14400 < th dose independent rect. 21 2
756 31.34 wind 1 43200 > th dose dependent rect. 6 6
785 31.35 wind 9 43200 < th dose dependent rect. 5 9
795 31.36 temperature 20 14400 > th dose independent rect. 21 1
830 31.38 temperature 20 14400 > th dose independent rect. 20 3
837 31.38 wind 3 43200 > th dose dependent rect. 9 1
850 31.39 wind 3 43200 > th dose independent rect. 6 6
861 31.39 atmosphere 995 43200 < th dose dependent sin 18 NA
864 31.39 wind 9 43200 < th dose dependent rect. 6 6
966 31.44 wind 3 43200 < th dose independent rect. 6 6