Os03g0617700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0617700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.85 | 0.579 | 5.41 | 0.397 | 0.289 | 1.3 | -0.756 | 0.663 | -0.0221 | 20.5 | 22.2 | 1952 | -- | -- |
| 153 | 0.576 | 5.39 | 0.588 | 0.284 | 1.26 | -0.841 | -- | 0.0342 | 20.5 | 22.4 | 1939 | -- | -- |
| 153.42 | 0.577 | 5.42 | 0.404 | 0.303 | 1.33 | -- | 0.782 | -0.0314 | 19.8 | 22.11 | 1959 | -- | -- |
| 154.78 | 0.579 | 5.39 | 0.644 | 0.301 | 1.3 | -- | -- | 0.0331 | 19.7 | 22.2 | 1951 | -- | -- |
| 158.25 | 0.586 | 5.41 | 0.401 | -- | 1.33 | -- | 0.811 | -0.0469 | -- | 22.07 | 1844 | -- | -- |
| 215.06 | 0.687 | 5.49 | 0.102 | 0.233 | -- | -0.808 | -- | -0.42 | 20.2 | -- | -- | -- | -- |
| 216.81 | 0.69 | 5.49 | 0.129 | 0.249 | -- | -- | -- | -0.418 | 19.2 | -- | -- | -- | -- |
| 159.6 | 0.588 | 5.38 | 0.629 | -- | 1.28 | -- | -- | 0.0202 | -- | 22.3 | 1889 | -- | -- |
| 164.3 | 0.597 | 5.41 | -- | 0.289 | 1.13 | -- | -- | -0.0816 | 20 | 22.3 | 1932 | -- | -- |
| 220.09 | 0.693 | 5.48 | 0.124 | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
| 217.24 | 0.689 | 5.49 | -- | 0.248 | -- | -- | -- | -0.433 | 19.2 | -- | -- | -- | -- |
| 168.36 | 0.604 | 5.41 | -- | -- | 1.1 | -- | -- | -0.0882 | -- | 22.42 | 1884 | -- | -- |
| 220.5 | 0.693 | 5.49 | -- | -- | -- | -- | -- | -0.436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 3 | 150.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 7 | 150.59 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 15 | 150.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 61 | 152.58 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 91 | 153.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 95 | 153.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 101 | 153.59 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 116 | 153.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 137 | 154.03 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 236 | 155.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 263 | 156.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 268 | 156.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 282 | 156.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 291 | 156.52 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 300 | 156.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 333 | 157.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 340 | 157.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 390 | 157.59 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 403 | 157.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 426 | 157.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 489 | 158.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 721 | 159.42 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 803 | 159.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |