Os03g0611200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldo/keto reductase family protein.
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Os03g0611200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldo/keto reductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.04 | 0.39 | 11.8 | -1.02 | 0.29 | -0.0954 | 0.035 | -5.9 | -0.627 | 23.7 | 30 | 1461 | -- | -- |
| 79.58 | 0.415 | 12 | -2.02 | 0.33 | -0.647 | 0.435 | -- | -0.715 | 23 | 32.52 | 5478 | -- | -- |
| 69.04 | 0.387 | 11.8 | -1.02 | 0.291 | -0.0956 | -- | -5.96 | -0.627 | 23.8 | 30 | 1470 | -- | -- |
| 77.45 | 0.41 | 11.9 | -2.11 | 0.328 | -0.757 | -- | -- | -0.697 | 23.3 | 32.6 | 5759 | -- | -- |
| 74.18 | 0.401 | 11.8 | -0.998 | -- | -0.099 | -- | -5.76 | -0.622 | -- | 29.9 | 1380 | -- | -- |
| 101.04 | 0.471 | 12 | -1.99 | 0.351 | -- | 0.143 | -- | -0.83 | 0.37 | -- | -- | -- | -- |
| 101.13 | 0.471 | 12 | -1.99 | 0.35 | -- | -- | -- | -0.831 | 0.432 | -- | -- | -- | -- |
| 82.13 | 0.422 | 11.9 | -2.17 | -- | -0.82 | -- | -- | -0.654 | -- | 32.6 | 5148 | -- | -- |
| 198.4 | 0.656 | 11.9 | -- | 0.282 | -0.482 | -- | -- | -0.518 | 23.2 | 31.9 | 4062 | -- | -- |
| 108.84 | 0.487 | 12 | -1.98 | -- | -- | -- | -- | -0.825 | -- | -- | -- | -- | -- |
| 205.95 | 0.671 | 11.9 | -- | 0.322 | -- | -- | -- | -0.609 | 0.117 | -- | -- | -- | -- |
| 203.09 | 0.664 | 11.9 | -- | -- | -0.54 | -- | -- | -0.505 | -- | 31.3 | 3399 | -- | -- |
| 212.5 | 0.68 | 11.9 | -- | -- | -- | -- | -- | -0.605 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 5 | 67.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 6 | 67.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 8 | 67.94 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 14 | 68.38 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 15 | 68.41 | temperature | 30.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 16 | 68.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 17 | 68.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 19 | 68.44 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 24 | 68.45 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 25 | 68.45 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 42 | 68.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 57 | 68.69 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 61 | 68.75 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 63 | 68.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 65 | 68.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 69 | 68.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 79 | 68.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 124 | 68.81 | temperature | 30.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 177 | 68.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 209 | 69.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 214 | 69.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 218 | 69.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 228 | 69.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 244 | 69.10 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 255 | 69.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 341 | 69.23 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 366 | 69.26 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 476 | 69.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 477 | 69.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 501 | 69.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 523 | 69.44 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 531 | 69.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 535 | 69.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 537 | 69.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 580 | 69.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 581 | 69.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 583 | 69.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 646 | 69.89 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 720 | 70.04 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 722 | 70.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 771 | 70.15 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 798 | 70.23 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 812 | 70.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 816 | 70.26 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 820 | 70.27 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 868 | 70.38 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 870 | 70.38 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 885 | 70.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 925 | 70.48 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 952 | 70.53 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 983 | 70.57 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 985 | 70.58 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |