FiT-DB / Search/ Help/ Sample detail

Os03g0610900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Serine/threonine-protein kinase SAPK10 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 10).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.92 (0.0185) R2 : 0.672
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.71 (0.131) R2dC : 5.16 R2C : -5.69
β3 : -3.67 (0.118) R2dE : 6.3 R2E : -4.59
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.384 (0.0386) R2dN8 : 0.0875 R2N8 : 0.0147
σ : 0.342
deviance : 54.07
__
_____
C
peak time of C : 0.407
E
wheather : radiation
threshold : 0.19
memory length : 196
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.46
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.05 0.345 9.92 0.243 3.79 -3.75 1.06 -1.11 -0.347 0.553 0.789 211 7.38 --
54.18 0.343 9.92 0.16 3.83 -3.8 0.0168 -- -0.353 0.518 0.6247 208 7.46 --
53.8 0.342 9.92 0.207 3.76 -3.76 -- -0.185 -0.355 0.508 0.2017 207 7.55 --
53.73 0.341 9.92 0.162 3.77 -3.75 -- -- -0.355 0.452 0.1992 201 7.54 --
126.96 0.525 9.83 0.237 -- -1.16 -- -0.411 -0.22 -- 1.005 3759 7.12 --
133.64 0.542 9.84 0.336 0.594 -- 1.38 -- -0.209 17.6 -- -- -- --
138.27 0.551 9.84 0.331 0.602 -- -- -- -0.203 17.4 -- -- -- --
113.95 0.497 9.85 0.179 -- -1.29 -- -- -0.358 -- 50.61 1203 11.2 --
54.07 0.342 9.92 -- 3.71 -3.67 -- -- -0.384 0.407 0.19 196 7.46 --
157.17 0.586 9.83 0.311 -- -- -- -- -0.218 -- -- -- -- --
141.16 0.556 9.85 -- 0.597 -- -- -- -0.24 17.4 -- -- -- --
96.86 0.458 9.87 -- -- -2.06 -- -- -0.395 -- 2.171 1144 13.4 --
159.72 0.59 9.84 -- -- -- -- -- -0.252 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.99 precipitation 0.1 270 < th dose independent rect. 14 17
2 51.99 precipitation 0.1 270 < th dose dependent rect. 14 17
3 52.61 wind 9.0 270 < th dose independent rect. 14 17
4 52.72 humidity 60.0 270 > th dose independent rect. 18 9
5 52.92 temperature 15.0 270 > th dose independent rect. 7 7
6 53.03 temperature 30.0 270 < th dose independent rect. 18 9
8 53.05 atmosphere 995.0 270 > th dose independent rect. 7 7
9 53.05 atmosphere 1015.0 270 < th dose independent rect. 7 7
10 53.05 precipitation 0.1 270 < th dose independent rect. 7 7
11 53.05 temperature 10.0 270 > th dose independent rect. 14 17
12 53.05 precipitation 0.1 270 < th dose dependent rect. 7 7
13 53.17 radiation 1.0 270 < th dose independent rect. 18 9
14 53.31 wind 9.0 270 < th dose independent rect. 7 7
15 53.39 radiation 1.0 270 < th dose dependent rect. 18 9
16 53.48 precipitation 0.1 270 < th dose independent rect. 3 15
17 53.48 precipitation 0.1 270 < th dose dependent rect. 3 15
18 53.54 radiation 1.0 270 > th dose independent rect. 14 16
19 53.65 radiation 1.0 270 > th dose independent rect. 7 7
25 54.36 temperature 10.0 270 > th dose independent rect. 18 9
27 54.36 radiation 20.0 270 < th dose independent rect. 18 9
30 54.36 temperature 10.0 270 > th dose independent rect. 3 15
31 54.36 atmosphere 1015.0 270 < th dose independent rect. 3 15
33 54.43 wind 9.0 270 < th dose independent rect. 3 15
34 54.50 wind 9.0 270 < th dose independent rect. 18 9
36 54.52 atmosphere 995.0 270 > th dose independent rect. 18 9
40 55.93 radiation 40.0 270 < th dose independent rect. 14 17
41 56.61 wind 9.0 270 < th dose independent rect. 13 6
42 56.72 precipitation 0.1 270 < th dose independent rect. 13 6
43 56.72 precipitation 0.1 270 < th dose dependent rect. 13 6
44 56.78 temperature 10.0 270 > th dose independent rect. 13 6
46 56.78 atmosphere 1010.0 270 < th dose independent rect. 13 6
48 56.78 temperature 10.0 270 > th dose independent rect. 19 18
49 56.78 atmosphere 995.0 270 > th dose independent rect. 19 18
50 57.02 wind 9.0 270 < th dose independent rect. 19 18
53 57.23 wind 1.0 270 > th dose independent rect. 13 6
59 57.83 radiation 1.0 270 > th dose independent sin 14 NA
60 58.08 radiation 1.0 270 < th dose dependent sin 14 NA
61 58.23 wind 1.0 270 > th dose independent rect. 7 7
62 58.27 precipitation 0.1 270 < th dose independent rect. 15 2
63 58.27 precipitation 0.1 270 < th dose dependent rect. 15 2
68 58.57 precipitation 0.1 270 < th dose independent rect. 18 9
69 58.57 precipitation 0.1 270 < th dose dependent rect. 18 9
70 58.73 wind 9.0 270 < th dose independent rect. 15 2
72 58.81 temperature 10.0 270 > th dose independent rect. 15 2
74 58.81 atmosphere 1010.0 270 < th dose independent rect. 15 2
76 58.81 temperature 10.0 270 > th dose independent rect. 17 22
77 58.83 wind 9.0 270 < th dose independent rect. 14 4
80 59.05 radiation 40.0 270 < th dose independent rect. 15 2
81 59.05 atmosphere 995.0 270 > th dose independent rect. 18 20
83 59.07 temperature 10.0 270 > th dose independent rect. 14 4
85 59.07 atmosphere 1010.0 270 < th dose independent rect. 14 4
87 59.07 temperature 10.0 270 > th dose independent rect. 18 20
88 59.10 humidity 50.0 270 > th dose independent rect. 7 7
91 59.16 wind 1.0 270 > th dose independent rect. 15 2
92 59.17 wind 1.0 270 > th dose independent rect. 14 4
95 59.31 precipitation 0.1 270 < th dose independent rect. 14 4
96 59.31 precipitation 0.1 270 < th dose dependent rect. 14 4
98 59.45 wind 9.0 270 < th dose independent rect. 18 20
102 59.75 radiation 1.0 270 > th dose independent rect. 15 2
114 60.04 humidity 50.0 270 > th dose independent rect. 19 18
115 60.05 precipitation 0.1 270 < th dose independent rect. 19 18
116 60.05 precipitation 0.1 270 < th dose dependent rect. 19 18
129 60.26 radiation 1.0 270 < th dose independent sin 14 NA
137 60.29 wind 9.0 270 < th dose independent rect. 17 22
143 60.42 radiation 1.0 270 < th dose dependent rect. 5 22
153 60.59 temperature 15.0 90 > th dose independent rect. 9 6
155 60.63 wind 9.0 90 < th dose independent rect. 9 6
158 60.66 atmosphere 1015.0 90 < th dose independent rect. 9 6
169 60.78 radiation 40.0 270 < th dose independent rect. 14 4
170 60.80 precipitation 0.1 90 < th dose independent rect. 9 6
171 60.80 precipitation 0.1 90 < th dose dependent rect. 9 6
172 60.81 temperature 10.0 270 > th dose dependent rect. 15 2
179 60.92 humidity 90.0 270 < th dose independent rect. 15 2
204 61.23 atmosphere 995.0 270 > th dose independent rect. 14 17
210 61.51 temperature 10.0 270 > th dose dependent rect. 14 4
224 61.69 radiation 1.0 270 > th dose independent rect. 14 5
239 61.78 temperature 10.0 270 > th dose dependent rect. 13 6
240 61.78 radiation 1.0 270 < th dose dependent rect. 7 20
277 62.54 atmosphere 995.0 270 > th dose independent rect. 13 6
285 62.87 temperature 10.0 270 > th dose dependent rect. 14 17
289 62.99 precipitation 0.1 270 < th dose independent rect. 18 20
290 62.99 precipitation 0.1 270 < th dose dependent rect. 18 20
291 63.01 wind 1.0 90 > th dose independent rect. 9 6
300 63.14 atmosphere 995.0 270 > th dose independent rect. 17 22
303 63.22 wind 1.0 270 > th dose independent rect. 18 9
335 63.41 radiation 1.0 90 < th dose dependent sin 12 NA
357 63.77 humidity 50.0 270 > th dose independent rect. 18 20
359 63.79 humidity 90.0 270 < th dose independent rect. 14 4
374 64.09 atmosphere 995.0 270 > th dose independent rect. 15 2
381 64.21 precipitation 0.1 270 < th dose independent rect. 1 7
384 64.21 precipitation 0.1 270 < th dose dependent rect. 1 7
390 64.26 humidity 90.0 270 < th dose independent rect. 13 6
410 64.73 atmosphere 995.0 270 > th dose independent rect. 14 4
412 64.74 radiation 30.0 270 < th dose independent rect. 1 8
424 64.93 humidity 70.0 270 > th dose independent rect. 1 7
427 64.99 wind 7.0 270 < th dose independent rect. 1 7
450 65.40 temperature 10.0 270 > th dose independent rect. 1 7
452 65.40 temperature 30.0 270 < th dose independent rect. 1 7
453 65.40 humidity 50.0 270 > th dose independent rect. 1 7
455 65.40 atmosphere 995.0 270 > th dose independent rect. 1 7
456 65.40 atmosphere 1015.0 270 < th dose independent rect. 1 7
457 65.40 temperature 10.0 270 > th dose independent rect. 8 17
458 65.40 atmosphere 1015.0 270 < th dose independent rect. 19 18
461 65.45 radiation 40.0 10 < th dose dependent rect. 15 5
462 65.47 humidity 50.0 270 > th dose independent rect. 8 17
500 65.77 temperature 10.0 270 > th dose dependent rect. 1 7
508 65.84 humidity 90.0 90 < th dose independent rect. 9 6
516 66.05 wind 9.0 10 < th dose independent rect. 15 5
517 66.05 radiation 40.0 270 < th dose dependent rect. 1 8
518 66.06 precipitation 0.1 10 < th dose independent rect. 15 5
520 66.06 precipitation 0.1 10 < th dose dependent rect. 15 5
523 66.09 wind 1.0 10 > th dose independent rect. 15 5
525 66.09 precipitation 0.1 270 < th dose independent rect. 17 22
526 66.09 precipitation 0.1 270 < th dose dependent rect. 17 22
536 66.20 radiation 40.0 10 < th dose independent rect. 15 5
540 66.26 temperature 10.0 10 > th dose independent rect. 15 5
542 66.26 atmosphere 1010.0 10 < th dose independent rect. 15 5
544 66.26 temperature 10.0 10 > th dose independent rect. 20 19
545 66.26 atmosphere 995.0 10 > th dose independent rect. 20 19
551 66.29 wind 9.0 10 < th dose independent rect. 20 19
552 66.31 wind 9.0 270 < th dose independent rect. 8 17
557 66.34 radiation 30.0 10 < th dose dependent rect. 5 15
570 66.50 atmosphere 995.0 270 > th dose independent rect. 3 15
578 66.61 radiation 1.0 90 > th dose independent sin 12 NA
635 66.93 humidity 50.0 270 > th dose dependent rect. 1 8
644 67.05 radiation 40.0 90 < th dose dependent rect. 15 18
649 67.09 atmosphere 1015.0 270 < th dose dependent rect. 15 2
652 67.12 wind 1.0 270 > th dose independent rect. 19 18
666 67.29 temperature 10.0 1440 > th dose independent rect. 16 5
670 67.29 temperature 10.0 1440 > th dose independent rect. 21 19
677 67.31 humidity 50.0 270 > th dose independent rect. 17 22
678 67.37 atmosphere 1015.0 270 < th dose independent rect. 14 17
689 67.47 radiation 20.0 30 < th dose independent rect. 4 16
699 67.67 temperature 10.0 90 > th dose dependent rect. 9 6
704 67.75 wind 9.0 270 < th dose dependent rect. 15 2
726 68.09 radiation 1.0 10 > th dose independent rect. 9 7
731 68.13 wind 9.0 270 < th dose dependent rect. 1 7
785 68.71 precipitation 0.1 270 < th dose independent rect. 8 17
786 68.71 temperature 10.0 10 > th dose dependent rect. 16 17
787 68.71 precipitation 0.1 270 < th dose dependent rect. 8 17
834 69.22 wind 9.0 270 < th dose dependent rect. 14 4
849 69.34 wind 9.0 270 < th dose dependent rect. 13 6
872 69.58 atmosphere 995.0 10 > th dose independent rect. 15 5
880 69.69 radiation 40.0 90 < th dose independent rect. 4 16
881 69.69 radiation 40.0 10 < th dose independent rect. 16 17
884 69.74 wind 9.0 10 < th dose independent rect. 16 17
887 69.76 temperature 10.0 10 > th dose independent rect. 9 7
889 69.76 atmosphere 1015.0 10 < th dose independent rect. 9 7
890 69.76 precipitation 0.1 10 < th dose independent rect. 9 7
891 69.76 temperature 10.0 10 > th dose independent rect. 16 17
892 69.76 precipitation 0.1 10 < th dose dependent rect. 9 7
945 70.26 wind 9.0 10 < th dose independent rect. 9 7
950 70.27 atmosphere 1015.0 270 < th dose dependent rect. 14 4
964 70.38 atmosphere 995.0 10 > th dose independent rect. 9 7
970 70.44 atmosphere 995.0 270 > th dose independent rect. 8 17