Os03g0610800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein zx.
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Os03g0610800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein zx.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.86 | 0.351 | 12.3 | 0.406 | 0.0329 | -1.16 | -0.385 | 4.7 | 0.00959 | 18.8 | 27.36 | 5476 | -- | -- |
| 56 | 0.349 | 12 | 0.524 | 0.0114 | -2.55 | 0.952 | -- | 0.242 | 8.25 | 16.91 | 33186 | -- | -- |
| 55.99 | 0.349 | 12.3 | 0.42 | 0.0693 | -1.16 | -- | 4.69 | 0.0181 | 14.5 | 27.6 | 5380 | -- | -- |
| 48.61 | 0.325 | 12.1 | 0.138 | 0.0361 | -3.21 | -- | -- | 0.0671 | 17.1 | 16.34 | 33289 | -- | -- |
| 56.26 | 0.349 | 12.3 | 0.418 | -- | -1.16 | -- | 4.68 | 0.0167 | -- | 27.6 | 5361 | -- | -- |
| 118.82 | 0.511 | 12 | 2.14 | 0.0104 | -- | -0.308 | -- | 0.643 | 21.3 | -- | -- | -- | -- |
| 119.14 | 0.511 | 12 | 2.16 | 0.0235 | -- | -- | -- | 0.644 | 17.6 | -- | -- | -- | -- |
| 48.6 | 0.325 | 12.1 | 0.0993 | -- | -3.18 | -- | -- | 0.0529 | -- | 16.63 | 33622 | -- | -- |
| 48.52 | 0.324 | 12.1 | -- | 0.0416 | -3.24 | -- | -- | 0.0233 | 15.7 | 16.86 | 33797 | -- | -- |
| 119.17 | 0.51 | 12 | 2.16 | -- | -- | -- | -- | 0.644 | -- | -- | -- | -- | -- |
| 241.67 | 0.727 | 12.1 | -- | 0.0272 | -- | -- | -- | 0.404 | 1.24 | -- | -- | -- | -- |
| 48.62 | 0.325 | 12.1 | -- | -- | -3.24 | -- | -- | 0.0245 | -- | 16.85 | 33701 | -- | -- |
| 241.71 | 0.726 | 12.1 | -- | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.80 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 2 | 49.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 3 | 49.43 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 5 | 49.52 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 6 | 49.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 7 | 49.53 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 8 | 49.73 | radiation | 10 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 12 | 49.76 | radiation | 10 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 14 | 49.77 | radiation | 10 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 19 | 49.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 20 | 49.94 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 22 | 49.99 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 25 | 50.13 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 28 | 50.20 | radiation | 30 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 30 | 50.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 31 | 50.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 32 | 50.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 36 | 50.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 37 | 50.40 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 40 | 50.41 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 57 | 50.46 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 89 | 50.69 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 106 | 50.75 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 140 | 50.92 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 143 | 50.94 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 144 | 50.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 152 | 51.03 | wind | 9 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 154 | 51.03 | humidity | 60 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 156 | 51.04 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 165 | 51.09 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 170 | 51.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 173 | 51.13 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 182 | 51.16 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 187 | 51.18 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 190 | 51.19 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 214 | 51.28 | humidity | 50 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 215 | 51.29 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 239 | 51.34 | humidity | 60 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 323 | 51.54 | humidity | 50 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 327 | 51.54 | humidity | 70 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 328 | 51.55 | humidity | 50 | 43200 | > th | dose independent | sin | 17 | NA |
| 345 | 51.58 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 353 | 51.59 | humidity | 50 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 358 | 51.59 | humidity | 70 | 43200 | < th | dose dependent | sin | 2 | NA |
| 368 | 51.61 | humidity | 50 | 43200 | < th | dose independent | rect. | 12 | 9 |
| 376 | 51.61 | radiation | 1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 403 | 51.67 | humidity | 60 | 43200 | > th | dose independent | sin | 6 | NA |
| 418 | 51.67 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 424 | 51.68 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 18 |
| 502 | 51.76 | humidity | 60 | 43200 | < th | dose independent | sin | 6 | NA |
| 508 | 51.76 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 613 | 51.85 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 22 |
| 623 | 51.86 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 634 | 51.88 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 651 | 51.90 | humidity | 50 | 43200 | < th | dose independent | sin | 17 | NA |
| 686 | 51.93 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 691 | 51.93 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 734 | 51.96 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 784 | 52.00 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 827 | 52.04 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 911 | 52.12 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 981 | 52.19 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 992 | 52.20 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 1 |