Os03g0609800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os03g0609800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.42 | 0.452 | 10.2 | 0.778 | 2.25 | 1.25 | 1.66 | 0.525 | 1.01 | 22.7 | 70.9 | 1335 | -- | -- |
| 92.92 | 0.449 | 10.2 | 0.86 | 2.25 | 1.29 | 1.62 | -- | 1.04 | 22.7 | 70.99 | 1323 | -- | -- |
| 103.78 | 0.474 | 10.2 | 0.744 | 2.24 | 1.24 | -- | 0.279 | 1.02 | 22.8 | 70.85 | 1326 | -- | -- |
| 103.94 | 0.475 | 10.2 | 0.789 | 2.25 | 1.25 | -- | -- | 1.03 | 22.8 | 70.83 | 1323 | -- | -- |
| 352.2 | 0.879 | 10.2 | 0.598 | -- | 0.92 | -- | 0.864 | 0.84 | -- | 72 | 1548 | -- | -- |
| 155.74 | 0.585 | 10.2 | 0.562 | 2.14 | -- | 1.4 | -- | 0.853 | 22.5 | -- | -- | -- | -- |
| 163.77 | 0.599 | 10.2 | 0.505 | 2.13 | -- | -- | -- | 0.849 | 22.5 | -- | -- | -- | -- |
| 353.62 | 0.88 | 10.2 | 0.591 | -- | 0.99 | -- | -- | 0.802 | -- | 70.83 | 1323 | -- | -- |
| 119.24 | 0.509 | 10.2 | -- | 2.24 | 1.16 | -- | -- | 0.944 | 22.8 | 71.35 | 1323 | -- | -- |
| 441.75 | 0.982 | 10.2 | 0.543 | -- | -- | -- | -- | 0.858 | -- | -- | -- | -- | -- |
| 170.49 | 0.611 | 10.2 | -- | 2.13 | -- | -- | -- | 0.792 | 22.5 | -- | -- | -- | -- |
| 356.7 | 0.883 | 10.2 | -- | -- | 0.957 | -- | -- | 0.798 | -- | 74 | 3030 | -- | -- |
| 449.52 | 0.99 | 10.2 | -- | -- | -- | -- | -- | 0.798 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.08 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 3 | 91.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 4 | 91.67 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 7 | 91.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 13 | 92.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 16 | 92.84 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 19 | 92.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 24 | 92.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 36 | 93.15 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 54 | 93.37 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 55 | 93.39 | humidity | 70 | 1440 | > th | dose independent | sin | 23 | NA |
| 58 | 93.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 67 | 93.58 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 78 | 93.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 79 | 93.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 96 | 93.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 97 | 93.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 99 | 93.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 100 | 93.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 113 | 93.89 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |
| 114 | 93.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 10 |
| 123 | 93.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 134 | 93.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 135 | 93.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 137 | 93.92 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 145 | 93.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 148 | 93.92 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 185 | 94.08 | humidity | 50 | 1440 | > th | dose dependent | sin | 0 | NA |
| 188 | 94.10 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 197 | 94.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 20 |
| 227 | 94.22 | humidity | 70 | 1440 | < th | dose independent | sin | 22 | NA |
| 306 | 94.69 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 308 | 94.69 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 592 | 95.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 13 |
| 597 | 95.52 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 605 | 95.54 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 657 | 95.77 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 711 | 95.99 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 21 |
| 716 | 96.00 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 740 | 96.03 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 982 | 96.63 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 9 |