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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0608000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0122) R2 : 0.00205
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0248 (0.0257) R2dN8 : 0.00265 R2N8 : 0.00205
σ : 0.23
deviance : 24.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.35 0.222 3.01 -0.0261 0.0813 0.0441 -0.103 0.6 -0.0244 7.27 20.1 120 -- --
23.17 0.226 3.02 -0.0403 0.0308 0.0753 -0.418 -- -0.0312 2.79 20.1 120 -- --
22.37 0.22 3.01 -0.0258 0.0803 0.0412 -- 0.583 -0.0245 7.59 20.05 120 -- --
23.54 0.227 3.01 -0.0267 0.0748 0.0515 -- -- -0.0287 7.7 20.05 120 -- --
22.72 0.222 3.01 -0.0274 -- 0.0417 -- 0.589 -0.0255 -- 20 120 -- --
23.21 0.226 3.01 -0.0314 0.0786 -- 0.368 -- -0.0275 11.4 -- -- -- --
23.65 0.228 3.01 -0.0182 0.0943 -- -- -- -0.0274 9.18 -- -- -- --
23.73 0.228 3.01 -0.0187 -- 0.0737 -- -- -0.025 -- 19.96 110 -- --
23.49 0.227 3.01 -- 0.0701 0.0649 -- -- -0.0243 7.05 19.95 120 -- --
24.17 0.23 3.01 -0.0185 -- -- -- -- -0.0269 -- -- -- -- --
23.66 0.228 3.01 -- 0.0943 -- -- -- -0.0253 9.2 -- -- -- --
23.74 0.228 3.01 -- -- 0.0737 -- -- -0.0229 -- 19.96 110 -- --
24.18 0.23 3.01 -- -- -- -- -- -0.0248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.24 radiation 10.0 10 > th dose independent rect. 6 1
27 19.24 radiation 10.0 10 > th dose dependent rect. 6 1
55 20.13 wind 1.0 10 < th dose independent rect. 6 1
56 20.21 wind 3.0 10 < th dose dependent rect. 6 1
62 20.68 atmosphere 1005.0 10 > th dose dependent rect. 6 1
64 20.85 humidity 80.0 30 > th dose dependent rect. 6 1
65 21.02 temperature 30.0 30 < th dose dependent rect. 6 1
67 21.02 radiation 10.0 10 < th dose dependent rect. 6 1
83 21.32 radiation 1.0 270 > th dose independent rect. 4 1
93 21.32 radiation 1.0 270 > th dose dependent rect. 4 1
117 21.35 humidity 90.0 90 < th dose independent rect. 6 1
122 21.37 humidity 90.0 30 < th dose independent rect. 3 5
125 21.39 temperature 20.0 10 > th dose independent rect. 6 1
128 21.40 temperature 25.0 90 < th dose independent rect. 6 1
129 21.40 atmosphere 1005.0 90 > th dose independent rect. 6 1
130 21.40 temperature 20.0 90 > th dose independent rect. 5 2
162 21.47 humidity 90.0 10 < th dose independent rect. 6 1
169 21.50 humidity 80.0 10 > th dose independent rect. 6 1
172 21.51 atmosphere 1005.0 10 > th dose independent rect. 6 1
178 21.52 humidity 90.0 30 < th dose independent rect. 20 12
182 21.53 temperature 10.0 30 > th dose independent rect. 6 1
185 21.53 humidity 50.0 30 > th dose independent rect. 6 1
188 21.53 atmosphere 995.0 30 > th dose independent rect. 6 1
191 21.53 atmosphere 1015.0 30 < th dose independent rect. 6 1
192 21.53 radiation 20.0 30 < th dose independent rect. 6 1
195 21.53 precipitation 0.1 30 < th dose independent rect. 6 1
196 21.53 temperature 10.0 30 > th dose independent rect. 7 23
197 21.53 precipitation 0.1 30 < th dose dependent rect. 6 1
200 21.55 wind 1.0 90 > th dose independent rect. 6 1
223 21.57 wind 9.0 1440 < th dose independent rect. 7 1
224 21.57 temperature 10.0 1440 > th dose independent rect. 7 1
228 21.57 temperature 30.0 1440 < th dose independent rect. 7 1
232 21.57 humidity 50.0 1440 > th dose independent rect. 7 1
237 21.57 atmosphere 995.0 1440 > th dose independent rect. 7 1
238 21.57 atmosphere 1015.0 1440 < th dose independent rect. 7 1
241 21.57 temperature 10.0 1440 > th dose independent rect. 8 23
244 21.57 atmosphere 1000.0 90 > th dose independent rect. 7 23
270 21.65 temperature 10.0 90 > th dose dependent rect. 6 1
290 21.67 temperature 10.0 10 > th dose dependent rect. 6 1
292 21.67 atmosphere 1005.0 30 > th dose dependent rect. 2 6
294 21.68 wind 9.0 30 < th dose independent rect. 7 23
314 21.70 temperature 30.0 10 < th dose independent rect. 8 22
326 21.73 precipitation 0.1 90 < th dose independent rect. 7 23
330 21.73 precipitation 0.1 90 < th dose dependent rect. 7 23
345 21.77 atmosphere 1000.0 10 > th dose independent rect. 8 22
377 21.85 atmosphere 1005.0 270 > th dose dependent rect. 3 1
394 21.87 temperature 15.0 10 > th dose dependent rect. 5 3
445 21.91 atmosphere 1000.0 720 > th dose independent rect. 22 21
483 21.94 atmosphere 1000.0 720 > th dose independent rect. 14 5
492 21.95 atmosphere 1000.0 720 > th dose independent rect. 7 19
550 22.00 temperature 25.0 720 < th dose independent rect. 2 6
555 22.00 humidity 50.0 720 > th dose independent rect. 19 18
569 22.01 temperature 10.0 720 > th dose independent rect. 13 6
570 22.01 atmosphere 1015.0 720 < th dose independent rect. 13 6
572 22.01 temperature 10.0 720 > th dose independent rect. 19 18
573 22.01 atmosphere 995.0 720 > th dose independent rect. 19 18
575 22.01 humidity 90.0 720 < th dose dependent rect. 20 1
581 22.02 temperature 20.0 720 > th dose independent rect. 20 1
596 22.02 wind 9.0 720 < th dose independent rect. 1 6
597 22.02 temperature 10.0 720 > th dose independent rect. 1 6
599 22.02 humidity 50.0 720 > th dose independent rect. 1 6
601 22.02 atmosphere 995.0 720 > th dose independent rect. 1 6
602 22.02 radiation 30.0 720 < th dose independent rect. 1 6
605 22.02 temperature 10.0 720 > th dose independent rect. 7 18
629 22.03 wind 1.0 720 > th dose independent rect. 13 6
639 22.04 wind 7.0 720 < th dose independent rect. 19 3
644 22.04 atmosphere 1000.0 10 > th dose independent rect. 8 12
654 22.05 wind 1.0 720 > th dose independent rect. 8 1
655 22.05 wind 7.0 720 < th dose independent rect. 20 1
657 22.05 humidity 90.0 720 < th dose independent rect. 20 2
664 22.05 atmosphere 1000.0 720 > th dose independent rect. 22 13
678 22.06 atmosphere 1000.0 720 > th dose independent rect. 23 11
689 22.07 humidity 90.0 90 < th dose independent rect. 8 11
696 22.07 atmosphere 995.0 720 > th dose dependent rect. 14 5
702 22.08 precipitation 0.1 720 < th dose independent rect. 13 6
703 22.08 wind 9.0 10 < th dose independent rect. 8 12
704 22.08 temperature 30.0 10 < th dose independent rect. 8 12
707 22.08 atmosphere 1015.0 10 < th dose independent rect. 20 12
710 22.08 precipitation 0.1 720 < th dose dependent rect. 13 6
711 22.09 atmosphere 1015.0 720 < th dose independent rect. 20 1
712 22.09 radiation 1.0 720 > th dose independent rect. 8 1
714 22.09 atmosphere 1015.0 720 < th dose independent rect. 19 3
720 22.09 precipitation 0.1 10 < th dose independent rect. 20 12
724 22.09 precipitation 0.1 720 < th dose independent rect. 10 21
728 22.09 precipitation 0.1 10 < th dose dependent rect. 20 12
729 22.09 precipitation 0.1 720 < th dose dependent rect. 10 21
731 22.10 humidity 70.0 720 > th dose independent rect. 19 3
732 22.10 precipitation 0.1 720 < th dose independent rect. 19 3
745 22.10 temperature 10.0 10 > th dose independent rect. 8 12
747 22.10 temperature 10.0 10 > th dose independent rect. 20 12
748 22.10 temperature 30.0 10 < th dose independent rect. 20 12
749 22.10 humidity 50.0 10 > th dose independent rect. 20 12
751 22.10 atmosphere 995.0 10 > th dose independent rect. 20 12
753 22.10 atmosphere 1015.0 10 < th dose independent rect. 8 12
755 22.10 radiation 40.0 10 < th dose independent rect. 20 12
764 22.10 precipitation 0.1 720 < th dose dependent rect. 19 3
770 22.11 temperature 10.0 720 > th dose independent rect. 19 3
771 22.11 temperature 30.0 720 < th dose independent rect. 19 3
772 22.11 humidity 50.0 720 > th dose independent rect. 19 3
773 22.11 atmosphere 995.0 720 > th dose independent rect. 19 3
774 22.11 radiation 1.0 720 < th dose independent rect. 19 3
779 22.11 precipitation 0.1 720 < th dose independent rect. 7 3
786 22.11 precipitation 0.1 720 < th dose independent rect. 23 11
788 22.11 wind 9.0 10 < th dose independent rect. 20 12
790 22.11 precipitation 0.1 10 < th dose independent rect. 8 12
791 22.11 precipitation 0.1 720 < th dose independent rect. 22 13
793 22.11 temperature 10.0 720 > th dose independent rect. 22 21
794 22.11 atmosphere 1015.0 30 < th dose dependent rect. 6 1
797 22.11 radiation 1.0 720 < th dose dependent rect. 19 3
802 22.11 precipitation 0.1 720 < th dose dependent rect. 7 3
806 22.11 precipitation 0.1 720 < th dose dependent rect. 23 11
807 22.11 precipitation 0.1 10 < th dose dependent rect. 8 12
808 22.11 precipitation 0.1 720 < th dose dependent rect. 22 13
843 22.12 wind 1.0 10 > th dose independent rect. 8 12
856 22.12 humidity 50.0 30 > th dose independent rect. 8 22
857 22.12 temperature 10.0 720 > th dose dependent rect. 20 1
863 22.12 atmosphere 995.0 720 > th dose dependent rect. 16 3
876 22.13 radiation 1.0 720 > th dose independent rect. 7 3
892 22.13 wind 9.0 720 < th dose independent rect. 19 18
894 22.13 temperature 10.0 720 > th dose dependent rect. 8 1
903 22.13 wind 5.0 10 < th dose dependent rect. 2 6
908 22.14 temperature 30.0 720 < th dose independent rect. 20 1
910 22.14 humidity 50.0 720 > th dose independent rect. 20 1
915 22.14 atmosphere 995.0 720 > th dose independent rect. 20 1
917 22.14 radiation 1.0 720 < th dose independent rect. 20 1
922 22.14 precipitation 0.1 720 < th dose independent rect. 8 1
923 22.14 precipitation 0.1 720 < th dose independent rect. 20 1
925 22.14 wind 1.0 720 > th dose independent rect. 19 3
932 22.14 humidity 80.0 90 > th dose independent rect. 5 6
934 22.14 humidity 80.0 90 > th dose independent rect. 5 8
942 22.14 temperature 30.0 720 < th dose independent rect. 19 18
943 22.14 precipitation 0.1 720 < th dose independent rect. 7 18
945 22.14 wind 5.0 10 < th dose independent rect. 12 20
947 22.14 temperature 10.0 720 > th dose independent rect. 21 23
949 22.14 radiation 1.0 720 < th dose dependent rect. 20 1
954 22.14 precipitation 0.1 720 < th dose dependent rect. 8 1
955 22.14 precipitation 0.1 720 < th dose dependent rect. 20 1
966 22.14 precipitation 0.1 720 < th dose dependent rect. 7 18
991 22.15 temperature 10.0 1440 > th dose independent rect. 9 12
994 22.15 temperature 10.0 1440 > th dose independent rect. 21 12
997 22.15 humidity 50.0 1440 > th dose independent rect. 21 12