Os03g0607800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0607800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.15 | 0.339 | 8.47 | -0.561 | 0.00888 | 1.43 | -1.11 | 1.94 | -0.141 | 14.6 | 20.06 | 8 | -- | -- |
| 54.63 | 0.347 | 8.51 | -0.9 | 0.000668 | 1.53 | -0.543 | -- | -0.237 | 15.4 | 20.06 | 8 | -- | -- |
| 54.87 | 0.345 | 8.49 | -0.775 | 0.0234 | 1.42 | -- | 0.75 | -0.196 | 12.4 | 20.2 | 3 | -- | -- |
| 55.44 | 0.347 | 8.51 | -0.904 | 0.0167 | 1.47 | -- | -- | -0.235 | 10.6 | 20.37 | 3 | -- | -- |
| 54.9 | 0.345 | 8.49 | -0.781 | -- | 1.44 | -- | 0.745 | -0.2 | -- | 20.2 | 3 | -- | -- |
| 88.27 | 0.44 | 8.45 | -0.592 | 0.56 | -- | -0.159 | -- | 0.0172 | 14.3 | -- | -- | -- | -- |
| 88.36 | 0.44 | 8.45 | -0.596 | 0.559 | -- | -- | -- | 0.0163 | 14.3 | -- | -- | -- | -- |
| 55.46 | 0.347 | 8.51 | -0.906 | -- | 1.48 | -- | -- | -0.237 | -- | 20.36 | 3 | -- | -- |
| 75.32 | 0.406 | 8.47 | -- | 0.135 | 1.18 | -- | -- | -0.0854 | 13.9 | 21.07 | 4 | -- | -- |
| 106.93 | 0.483 | 8.46 | -0.62 | -- | -- | -- | -- | 0.00268 | -- | -- | -- | -- | -- |
| 97.73 | 0.462 | 8.44 | -- | 0.571 | -- | -- | -- | 0.0827 | 14.3 | -- | -- | -- | -- |
| 76.06 | 0.408 | 8.48 | -- | -- | 1.3 | -- | -- | -0.106 | -- | 20.89 | 3 | -- | -- |
| 117.06 | 0.505 | 8.44 | -- | -- | -- | -- | -- | 0.0715 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 7 | 52.27 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 8 | 52.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 18 | 52.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 18 |
| 22 | 53.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 23 | 53.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 24 | 53.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 25 | 53.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 26 | 53.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 18 |
| 36 | 53.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 55 | 54.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 70 | 54.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 71 | 54.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 75 | 54.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 77 | 54.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 90 | 54.88 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 91 | 54.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 94 | 54.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 101 | 55.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 128 | 55.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 131 | 55.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 157 | 56.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 160 | 56.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 162 | 56.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 262 | 57.65 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 296 | 58.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 311 | 58.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 313 | 58.17 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 333 | 58.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 382 | 58.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 402 | 58.58 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 443 | 58.71 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 506 | 58.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 708 | 59.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 725 | 59.54 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 774 | 59.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 821 | 59.76 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |
| 860 | 59.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 973 | 60.12 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 22 |