Os03g0606200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial ATP synthase 6 KD subunit.
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Os03g0606200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial ATP synthase 6 KD subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.46 | 0.185 | 12.7 | -0.54 | 0.442 | -0.204 | -0.0117 | -0.937 | -0.0459 | 0.00748 | 18.5 | 4368 | -- | -- |
| 16.28 | 0.188 | 12.7 | -0.566 | 0.452 | -0.171 | -0.0423 | -- | -0.0606 | 0.128 | 22.2 | 25228 | -- | -- |
| 15.4 | 0.183 | 12.7 | -0.545 | 0.439 | -0.208 | -- | -0.957 | -0.0474 | 0.0193 | 16.99 | 4375 | -- | -- |
| 16.23 | 0.188 | 12.7 | -0.586 | 0.429 | -0.19 | -- | -- | -0.0677 | 24 | 21.87 | 25239 | -- | -- |
| 23.75 | 0.228 | 12.7 | -0.577 | -- | 0.27 | -- | -0.0439 | -0.034 | -- | 16.99 | 4375 | -- | -- |
| 17.48 | 0.196 | 12.7 | -0.601 | 0.446 | -- | -0.00917 | -- | -0.0274 | 0.0502 | -- | -- | -- | -- |
| 17.48 | 0.196 | 12.7 | -0.601 | 0.446 | -- | -- | -- | -0.0273 | 0.0524 | -- | -- | -- | -- |
| 23.76 | 0.228 | 12.7 | -0.575 | -- | 0.27 | -- | -- | -0.0337 | -- | 16.99 | 4375 | -- | -- |
| 21.76 | 0.217 | 12.7 | -- | 0.448 | -0.444 | -- | -- | 0.103 | 0.0305 | 49.81 | 47520 | -- | -- |
| 29.99 | 0.256 | 12.7 | -0.587 | -- | -- | -- | -- | -0.021 | -- | -- | -- | -- | -- |
| 26.99 | 0.243 | 12.7 | -- | 0.438 | -- | -- | -- | 0.0396 | 24 | -- | -- | -- | -- |
| 32.47 | 0.266 | 12.7 | -- | -- | 0.277 | -- | -- | 0.0296 | -- | 16.99 | 4375 | -- | -- |
| 39.07 | 0.292 | 12.7 | -- | -- | -- | -- | -- | 0.0441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.76 | humidity | 80 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 6 | 14.85 | humidity | 80 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 11 | 15.00 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 15 | 15.06 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 18 | 15.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 20 | 15.09 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 25 | 15.12 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 31 | 15.15 | humidity | 80 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 40 | 15.20 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 49 | 15.22 | humidity | 80 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 52 | 15.24 | radiation | 20 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 53 | 15.24 | radiation | 20 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 66 | 15.26 | radiation | 20 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 68 | 15.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 82 | 15.35 | humidity | 80 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 96 | 15.39 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 100 | 15.40 | humidity | 80 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 116 | 15.44 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 153 | 15.49 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 164 | 15.50 | radiation | 20 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 169 | 15.51 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 247 | 15.56 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 23 |
| 287 | 15.59 | radiation | 20 | 4320 | < th | dose independent | sin | 2 | NA |
| 298 | 15.60 | radiation | 20 | 4320 | < th | dose independent | sin | 0 | NA |
| 326 | 15.61 | radiation | 40 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 349 | 15.62 | radiation | 20 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 350 | 15.62 | radiation | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 385 | 15.62 | radiation | 20 | 4320 | < th | dose dependent | rect. | 7 | 7 |
| 388 | 15.62 | radiation | 20 | 4320 | < th | dose dependent | rect. | 7 | 9 |
| 389 | 15.63 | radiation | 20 | 4320 | > th | dose independent | sin | 2 | NA |
| 394 | 15.63 | radiation | 40 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 448 | 15.64 | radiation | 10 | 4320 | > th | dose dependent | rect. | 13 | 2 |
| 456 | 15.65 | radiation | 20 | 4320 | < th | dose independent | no | NA | NA |
| 457 | 15.65 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 563 | 15.65 | radiation | 20 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 573 | 15.65 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 600 | 15.66 | radiation | 20 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 642 | 15.68 | radiation | 20 | 4320 | > th | dose independent | no | NA | NA |
| 759 | 15.68 | radiation | 20 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 813 | 15.69 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 814 | 15.69 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 815 | 15.69 | radiation | 30 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 839 | 15.70 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 874 | 15.71 | humidity | 80 | 14400 | > th | dose independent | sin | 13 | NA |
| 915 | 15.71 | radiation | 20 | 4320 | < th | dose dependent | rect. | 20 | 20 |
| 949 | 15.72 | radiation | 20 | 4320 | < th | dose dependent | sin | 23 | NA |
| 951 | 15.72 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 976 | 15.73 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 990 | 15.73 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 13 |