Os03g0605300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease (Fragment).
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Os03g0605300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.67 | 0.522 | 10.7 | -2.69 | 1.72 | 1.18 | 1.27 | -1.96 | -0.658 | 6.89 | 24.62 | 1349 | -- | -- |
| 125.44 | 0.522 | 10.7 | -2.21 | 1.73 | 1.09 | 1.41 | -- | -0.59 | 6.92 | 23.04 | 1302 | -- | -- |
| 127.72 | 0.526 | 10.7 | -2.65 | 1.74 | 1.19 | -- | -2.08 | -0.604 | 6.94 | 25.47 | 1308 | -- | -- |
| 129.4 | 0.53 | 10.6 | -2.14 | 1.72 | 1.03 | -- | -- | -0.593 | 6.92 | 22.92 | 1318 | -- | -- |
| 282.6 | 0.783 | 10.7 | -2.6 | -- | 1.26 | -- | -1.63 | -0.673 | -- | 23.9 | 1351 | -- | -- |
| 161.97 | 0.597 | 10.6 | -1.81 | 1.77 | -- | 1.38 | -- | -0.38 | 6.62 | -- | -- | -- | -- |
| 166.73 | 0.605 | 10.6 | -1.79 | 1.77 | -- | -- | -- | -0.384 | 6.62 | -- | -- | -- | -- |
| 283.76 | 0.785 | 10.7 | -2.14 | -- | 1.1 | -- | -- | -0.54 | -- | 23.9 | 1356 | -- | -- |
| 235.46 | 0.715 | 10.5 | -- | 1.73 | 0.561 | -- | -- | -0.1 | 6.87 | 28.71 | 1274 | -- | -- |
| 330.13 | 0.849 | 10.6 | -1.75 | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
| 251.29 | 0.742 | 10.6 | -- | 1.75 | -- | -- | -- | -0.185 | 6.68 | -- | -- | -- | -- |
| 391.61 | 0.922 | 10.6 | -- | -- | 0.604 | -- | -- | -0.064 | -- | 28.7 | 1354 | -- | -- |
| 410.82 | 0.946 | 10.6 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.04 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 114.77 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 5 | 114.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 6 | 115.10 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 7 | 115.13 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 20 | 116.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 27 | 116.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 30 | 116.45 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 32 | 116.56 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 39 | 117.06 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 48 | 117.50 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 57 | 117.90 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 19 |
| 59 | 118.04 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 19 |
| 91 | 118.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 93 | 118.87 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 13 |
| 94 | 118.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 97 | 118.93 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 114 | 119.17 | wind | 7 | 43200 | < th | dose independent | sin | 15 | NA |
| 115 | 119.18 | wind | 7 | 43200 | > th | dose independent | sin | 15 | NA |
| 130 | 119.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 150 | 119.56 | wind | 5 | 43200 | > th | dose dependent | sin | 15 | NA |
| 321 | 120.84 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 404 | 121.21 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 461 | 121.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 478 | 121.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 494 | 121.67 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 508 | 121.74 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 518 | 121.76 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 520 | 121.76 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 538 | 121.80 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 555 | 121.87 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 595 | 121.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 610 | 122.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 19 |
| 631 | 122.07 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 662 | 122.15 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 19 |
| 844 | 122.56 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 881 | 122.64 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 896 | 122.66 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |