Os03g0604600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0604600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.58 | 0.452 | 8.14 | 1.93 | 0.786 | 0.397 | -1.91 | -9.36 | 0.0392 | 20.6 | 29.8 | 888 | -- | -- |
| 111.75 | 0.492 | 8.29 | 0.986 | 0.915 | 1.23 | -1.43 | -- | -0.0654 | 19.9 | 14.4 | 3201 | -- | -- |
| 102.2 | 0.471 | 8.13 | 2.02 | 0.84 | 0.422 | -- | -8.55 | 0.00635 | 20.1 | 30 | 1040 | -- | -- |
| 113.38 | 0.496 | 8.31 | 0.969 | 0.856 | 1.04 | -- | -- | -0.112 | 20.4 | 14.52 | 3202 | -- | -- |
| 133.07 | 0.537 | 8.18 | 1.56 | -- | -0.033 | -- | -8.76 | -0.0405 | -- | 30 | 710 | -- | -- |
| 113.37 | 0.499 | 8.32 | 0.716 | 0.863 | -- | -1.27 | -- | -0.168 | 20.6 | -- | -- | -- | -- |
| 118.45 | 0.51 | 8.32 | 0.759 | 0.873 | -- | -- | -- | -0.166 | 20.4 | -- | -- | -- | -- |
| 152.18 | 0.575 | 8.3 | 0.92 | -- | -0.333 | -- | -- | -0.0665 | -- | 32.98 | 3019 | -- | -- |
| 132.32 | 0.539 | 8.34 | -- | 0.862 | 0.819 | -- | -- | -0.246 | 20.4 | 14.52 | 3202 | -- | -- |
| 160.83 | 0.593 | 8.3 | 0.754 | -- | -- | -- | -- | -0.175 | -- | -- | -- | -- | -- |
| 133.65 | 0.541 | 8.34 | -- | 0.87 | -- | -- | -- | -0.251 | 20.4 | -- | -- | -- | -- |
| 153.17 | 0.576 | 8.29 | -- | -- | -0.726 | -- | -- | -0.153 | -- | 32.46 | 6271 | -- | -- |
| 175.83 | 0.619 | 8.32 | -- | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 7 | 92.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 9 | 92.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 15 | 92.93 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 19 | 92.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 20 | 92.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 25 | 93.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 38 | 93.44 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 23 |
| 42 | 93.49 | temperature | 25.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 43 | 93.51 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 49 | 93.62 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 50 | 93.62 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 69 | 93.80 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 81 | 93.88 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 82 | 93.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 83 | 93.89 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 23 |
| 91 | 94.00 | temperature | 30.0 | 720 | < th | dose independent | sin | 21 | NA |
| 102 | 94.09 | temperature | 25.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 106 | 94.12 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 126 | 94.27 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 131 | 94.30 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 144 | 94.45 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 146 | 94.46 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 156 | 94.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 157 | 94.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 176 | 94.69 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 190 | 94.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 23 |
| 198 | 94.73 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 215 | 94.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 216 | 94.78 | temperature | 30.0 | 720 | < th | dose independent | no | NA | NA |
| 220 | 94.79 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 223 | 94.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 231 | 94.83 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 235 | 94.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 236 | 94.85 | temperature | 30.0 | 720 | > th | dose independent | sin | 21 | NA |
| 246 | 94.91 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 256 | 94.96 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 276 | 95.01 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 19 |
| 281 | 95.05 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 287 | 95.07 | temperature | 30.0 | 720 | > th | dose independent | no | NA | NA |
| 383 | 95.09 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 411 | 95.18 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 413 | 95.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 415 | 95.21 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 416 | 95.21 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 438 | 95.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 9 |
| 449 | 95.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 475 | 95.47 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 479 | 95.48 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 480 | 95.49 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 481 | 95.49 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 4 |
| 547 | 95.66 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 552 | 95.69 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 553 | 95.71 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 561 | 95.73 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 562 | 95.74 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 568 | 95.76 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 573 | 95.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 574 | 95.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 576 | 95.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 579 | 95.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 12 |
| 621 | 95.86 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 643 | 95.93 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 17 | NA |
| 654 | 95.97 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 658 | 95.98 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 23 |
| 676 | 96.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 679 | 96.05 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 16 |
| 680 | 96.05 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 699 | 96.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 15 |
| 712 | 96.12 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 721 | 96.15 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 736 | 96.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 739 | 96.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 772 | 96.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 783 | 96.27 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 812 | 96.34 | temperature | 10.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 820 | 96.35 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 834 | 96.38 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 840 | 96.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 842 | 96.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 904 | 96.49 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 930 | 96.51 | humidity | 60.0 | 720 | > th | dose independent | rect. | 13 | 6 |
| 938 | 96.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 986 | 96.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |