Os03g0601100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0601100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.97 | 0.325 | 8.61 | 0.177 | 1.08 | 1.58 | 0.289 | -0.0402 | 0.197 | 10.4 | 10.02 | 597 | -- | -- |
| 47.97 | 0.323 | 8.61 | 0.184 | 1.08 | 1.58 | 0.292 | -- | 0.199 | 10.4 | 10.23 | 588 | -- | -- |
| 48.26 | 0.324 | 8.62 | 0.159 | 1.08 | 1.59 | -- | -0.21 | 0.188 | 10.3 | 10.94 | 577 | -- | -- |
| 48.3 | 0.324 | 8.61 | 0.198 | 1.06 | 1.59 | -- | -- | 0.199 | 10.3 | 11.36 | 559 | -- | -- |
| 70.34 | 0.391 | 8.64 | 0.246 | -- | 1.88 | -- | 0.297 | 0.188 | -- | 6.754 | 2 | -- | -- |
| 77.49 | 0.413 | 8.57 | 0.557 | 0.835 | -- | 0.379 | -- | 0.438 | 11.8 | -- | -- | -- | -- |
| 78.09 | 0.414 | 8.57 | 0.572 | 0.834 | -- | -- | -- | 0.439 | 11.7 | -- | -- | -- | -- |
| 70.41 | 0.391 | 8.65 | 0.205 | -- | 1.89 | -- | -- | 0.176 | -- | 5.83 | 2 | -- | -- |
| 49.2 | 0.327 | 8.62 | -- | 1.09 | 1.68 | -- | -- | 0.166 | 10.3 | 11.52 | 587 | -- | -- |
| 121.81 | 0.516 | 8.59 | 0.548 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 86.71 | 0.436 | 8.58 | -- | 0.827 | -- | -- | -- | 0.375 | 11.6 | -- | -- | -- | -- |
| 71.46 | 0.394 | 8.65 | -- | -- | 1.95 | -- | -- | 0.146 | -- | 6.815 | 2 | -- | -- |
| 129.73 | 0.532 | 8.6 | -- | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 2 | 44.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 4 | 44.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 5 | 44.77 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 6 | 44.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 12 | 45.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 32 | 45.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 99 | 46.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 19 |
| 186 | 47.73 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 191 | 47.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 243 | 48.24 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 267 | 48.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 320 | 48.78 | temperature | 30 | 270 | < th | dose dependent | sin | 20 | NA |
| 336 | 48.87 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 337 | 48.87 | temperature | 30 | 720 | < th | dose dependent | sin | 0 | NA |
| 347 | 48.92 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 456 | 49.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 504 | 49.67 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 547 | 49.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 548 | 49.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 566 | 49.80 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 669 | 49.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 719 | 50.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 774 | 50.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 908 | 50.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 927 | 50.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |