Os03g0599600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0599600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.78 | 0.318 | 9.92 | -0.372 | 1.02 | 1.74 | -0.361 | 0.269 | 0.149 | 14.2 | 20.8 | 12 | -- | -- |
| 45.84 | 0.315 | 9.92 | -0.418 | 1.01 | 1.76 | -0.293 | -- | 0.141 | 14.2 | 20.8 | 12 | -- | -- |
| 46.1 | 0.316 | 9.93 | -0.442 | 1.02 | 1.75 | -- | -0.142 | 0.127 | 14.2 | 20.87 | 12 | -- | -- |
| 46.12 | 0.316 | 9.92 | -0.426 | 1.02 | 1.74 | -- | -- | 0.134 | 14.2 | 20.8 | 12 | -- | -- |
| 86.38 | 0.433 | 9.96 | -0.648 | -- | 2.63 | -- | -0.511 | -0.0179 | -- | 21 | 12 | -- | -- |
| 92.36 | 0.451 | 9.86 | -0.0608 | 1.68 | -- | 0.12 | -- | 0.433 | 14.3 | -- | -- | -- | -- |
| 92.42 | 0.45 | 9.85 | -0.0575 | 1.68 | -- | -- | -- | 0.434 | 14.3 | -- | -- | -- | -- |
| 86.39 | 0.433 | 9.97 | -0.658 | -- | 2.7 | -- | -- | -0.0461 | -- | 20.9 | 12 | -- | -- |
| 50.6 | 0.331 | 9.91 | -- | 1.09 | 1.6 | -- | -- | 0.205 | 14.1 | 20.89 | 18 | -- | -- |
| 259.97 | 0.753 | 9.87 | -0.128 | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
| 92.5 | 0.45 | 9.85 | -- | 1.68 | -- | -- | -- | 0.44 | 14.3 | -- | -- | -- | -- |
| 97.11 | 0.459 | 9.94 | -- | -- | 2.57 | -- | -- | 0.051 | -- | 21.01 | 10 | -- | -- |
| 260.4 | 0.753 | 9.86 | -- | -- | -- | -- | -- | 0.407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 2 | 45.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 4 | 45.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 46.05 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 10 | 46.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 11 | 46.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 19 | 46.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 25 | 46.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 33 | 47.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 36 | 47.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 40 | 47.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 47 | 47.66 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 56 | 47.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 60 | 47.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 63 | 48.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 71 | 48.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 75 | 48.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 80 | 48.31 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 96 | 48.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 100 | 48.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 120 | 48.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 147 | 49.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 191 | 49.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 196 | 49.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 219 | 49.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 220 | 49.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 221 | 49.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 230 | 50.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 252 | 50.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 255 | 50.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 271 | 50.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 273 | 50.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 291 | 50.58 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 359 | 51.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 425 | 51.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 438 | 51.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 462 | 51.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 512 | 52.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 605 | 52.66 | temperature | 20 | 270 | > th | dose dependent | sin | 2 | NA |
| 614 | 52.70 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 706 | 53.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 717 | 53.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 759 | 53.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |