Os03g0599500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0599500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.92 | 0.772 | 4.24 | 0.53 | 0.906 | 2.31 | -0.0701 | 0.753 | 0.194 | 23 | 24.99 | 4169 | -- | -- |
| 270.35 | 0.766 | 4.22 | 0.668 | 0.951 | 2.27 | -0.0246 | -- | 0.234 | 23 | 26.29 | 4037 | -- | -- |
| 269.94 | 0.765 | 4.24 | 0.535 | 0.909 | 2.3 | -- | 0.703 | 0.192 | 23 | 25.14 | 4166 | -- | -- |
| 270.19 | 0.766 | 4.22 | 0.631 | 0.928 | 2.18 | -- | -- | 0.203 | 23 | 26.29 | 4137 | -- | -- |
| 316.93 | 0.829 | 4.23 | 0.537 | -- | 2.37 | -- | 1 | 0.168 | -- | 23.89 | 4424 | -- | -- |
| 351.84 | 0.879 | 4.35 | -0.451 | 0.843 | -- | -0.121 | -- | -0.351 | 22.6 | -- | -- | -- | -- |
| 351.91 | 0.878 | 4.35 | -0.446 | 0.843 | -- | -- | -- | -0.35 | 22.6 | -- | -- | -- | -- |
| 317.87 | 0.83 | 4.2 | 0.682 | -- | 2.2 | -- | -- | 0.215 | -- | 25.13 | 4450 | -- | -- |
| 275.3 | 0.773 | 4.25 | -- | 0.955 | 1.84 | -- | -- | 0.0893 | 23.1 | 28.5 | 2718 | -- | -- |
| 395.66 | 0.929 | 4.33 | -0.43 | -- | -- | -- | -- | -0.346 | -- | -- | -- | -- | -- |
| 357.14 | 0.884 | 4.34 | -- | 0.84 | -- | -- | -- | -0.301 | 22.6 | -- | -- | -- | -- |
| 313.75 | 0.828 | 4.24 | -- | -- | 1.99 | -- | -- | 0.0403 | -- | 29 | 4507 | -- | -- |
| 400.54 | 0.934 | 4.32 | -- | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 268.35 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 3 | 268.45 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 5 | 268.48 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 20 | 268.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 14 |
| 38 | 268.82 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 50 | 268.88 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 10 |
| 68 | 268.97 | temperature | 25 | 4320 | < th | dose dependent | sin | 9 | NA |
| 292 | 269.72 | temperature | 15 | 4320 | > th | dose dependent | sin | 10 | NA |
| 424 | 270.10 | temperature | 15 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 458 | 270.20 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 462 | 270.21 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 478 | 270.25 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 23 |
| 510 | 270.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 556 | 270.47 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |