Os03g0598900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DSBA oxidoreductase family protein.
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Os03g0598900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DSBA oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.38 | 0.241 | 10.1 | -0.125 | 0.662 | 0.295 | 0.189 | -0.0559 | 0.207 | 9.87 | 19.83 | 10 | -- | -- |
| 26.38 | 0.239 | 10.1 | -0.124 | 0.661 | 0.296 | 0.226 | -- | 0.209 | 9.89 | 19.68 | 9 | -- | -- |
| 26.47 | 0.24 | 10.1 | -0.128 | 0.668 | 0.3 | -- | -0.129 | 0.218 | 9.88 | 19.82 | 9 | -- | -- |
| 26.6 | 0.24 | 10.1 | -0.115 | 0.661 | 0.292 | -- | -- | 0.208 | 9.86 | 19.67 | 9 | -- | -- |
| 42.93 | 0.307 | 10.1 | -0.119 | -- | -0.0615 | -- | -0.0755 | 0.218 | -- | 19.82 | 9 | -- | -- |
| 29.58 | 0.255 | 10.1 | -0.123 | 0.489 | -- | 0.22 | -- | 0.213 | 8.75 | -- | -- | -- | -- |
| 29.74 | 0.255 | 10.1 | -0.116 | 0.489 | -- | -- | -- | 0.213 | 8.74 | -- | -- | -- | -- |
| 34.66 | 0.274 | 10.1 | -0.137 | -- | -0.28 | -- | -- | 0.206 | -- | 0.1207 | 2 | -- | -- |
| 26.94 | 0.242 | 10.1 | -- | 0.654 | 0.29 | -- | -- | 0.217 | 9.86 | 19.69 | 9 | -- | -- |
| 43.29 | 0.307 | 10.1 | -0.115 | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
| 30.1 | 0.257 | 10.1 | -- | 0.489 | -- | -- | -- | 0.225 | 8.75 | -- | -- | -- | -- |
| 35.12 | 0.276 | 10.1 | -- | -- | -0.279 | -- | -- | 0.208 | -- | 0.13 | 2 | -- | -- |
| 43.64 | 0.308 | 10.1 | -- | -- | -- | -- | -- | 0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.40 | radiation | 20.0 | 90 | < th | dose independent | rect. | 12 | 22 |
| 2 | 25.40 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 4 | 25.57 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 5 | 25.57 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 10 | 25.63 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 14 | 25.69 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 16 |
| 18 | 25.76 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 19 | 25.78 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 20 | 25.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 24 | 25.82 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 28 | 25.85 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 29 | 25.85 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 30 | 25.86 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 32 | 25.88 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 22 |
| 39 | 25.91 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 45 | 25.93 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 46 | 25.94 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 4 |
| 47 | 25.94 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 61 | 25.97 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 74 | 25.97 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 85 | 26.02 | wind | 5.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 103 | 26.05 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 105 | 26.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 111 | 26.09 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 127 | 26.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 128 | 26.12 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 133 | 26.13 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 138 | 26.13 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 139 | 26.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 152 | 26.15 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 156 | 26.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 160 | 26.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 161 | 26.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 170 | 26.17 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 172 | 26.18 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 186 | 26.18 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 187 | 26.19 | radiation | 10.0 | 10 | < th | dose independent | sin | 1 | NA |
| 188 | 26.19 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 207 | 26.21 | wind | 5.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 242 | 26.23 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 245 | 26.23 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 263 | 26.24 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 267 | 26.25 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 315 | 26.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 321 | 26.28 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 325 | 26.29 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 346 | 26.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 349 | 26.31 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 359 | 26.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 365 | 26.31 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 370 | 26.32 | wind | 7.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 373 | 26.32 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 383 | 26.32 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 7 |
| 391 | 26.32 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 400 | 26.33 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 406 | 26.33 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 415 | 26.34 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 426 | 26.34 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 442 | 26.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 479 | 26.36 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 483 | 26.36 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 507 | 26.36 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 537 | 26.37 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 540 | 26.37 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 547 | 26.37 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 558 | 26.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 566 | 26.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 573 | 26.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 12 |
| 601 | 26.39 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 638 | 26.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 659 | 26.41 | temperature | 25.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 660 | 26.41 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 690 | 26.42 | radiation | 10.0 | 270 | < th | dose independent | sin | 5 | NA |
| 695 | 26.42 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 696 | 26.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 699 | 26.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 713 | 26.42 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 731 | 26.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 741 | 26.43 | wind | 7.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 743 | 26.43 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 802 | 26.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 864 | 26.44 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 923 | 26.45 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 930 | 26.45 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 940 | 26.45 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 993 | 26.46 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |