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Os03g0598200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nop14-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0215) R2 : 0.681
β1 : 1.49 (0.0789) R2dD : 0.238 R2D : 0.151
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.23 (0.0486) R2dE : 0.471 R2E : 0.403
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.423 (0.0462) R2dN8 : 0.088 R2N8 : -0.0048
σ : 0.403
deviance : 74.75
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 5.334
memory length : 328
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.6
open length of G : 2

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.11 0.364 11 1.43 0.647 -1.04 -0.127 -0.0918 0.448 15.5 4.899 292 2.97 2.5
60.08 0.361 11 1.45 0.65 -1.04 -0.11 -- 0.448 15.5 4.499 291 2.97 2.5
60.06 0.361 11 1.43 0.647 -1.03 -- -0.0302 0.447 15.5 4.2 293 2.99 2.45
60.02 0.361 11 1.43 0.658 -1.02 -- -- 0.444 15.5 4.699 291 3.05 2.38
77.43 0.41 11 1.55 -- -1.23 -- 0.258 0.495 -- 5.2 294 2.77 2.5
87.79 0.439 11 1.38 1.35 -- 0.254 -- 0.377 17 -- -- -- --
87.95 0.439 11 1.39 1.35 -- -- -- 0.378 17 -- -- -- --
74.75 0.403 11 1.49 -- -1.23 -- -- 0.423 -- 5.334 328 2.6 2
114.03 0.497 11 -- 0.654 -0.988 -- -- 0.295 15.4 5.3 285 3.28 2.2
184.26 0.634 11 1.34 -- -- -- -- 0.344 -- -- -- -- --
138.54 0.551 11 -- 1.33 -- -- -- 0.224 17 -- -- -- --
129.1 0.529 11 -- -- -1.22 -- -- 0.31 -- 6.1 326 2.6 2.23
231.37 0.71 11 -- -- -- -- -- 0.195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.06 wind 5.0 270 < th dose independent rect. 3 3
2 62.02 precipitation 0.1 270 < th dose independent rect. 3 3
3 62.02 precipitation 0.1 270 < th dose dependent rect. 3 3
4 62.20 wind 5.0 270 < th dose independent rect. 2 5
6 62.61 wind 9.0 270 < th dose independent rect. 6 21
7 62.63 wind 5.0 270 < th dose independent rect. 4 1
8 62.95 atmosphere 1010.0 270 < th dose independent rect. 3 3
10 62.98 temperature 10.0 270 > th dose independent rect. 3 3
12 62.98 temperature 30.0 270 < th dose independent rect. 3 3
13 62.98 humidity 50.0 270 > th dose independent rect. 3 3
16 62.98 atmosphere 995.0 270 > th dose independent rect. 3 3
18 62.98 radiation 20.0 270 < th dose independent rect. 3 3
21 62.98 temperature 10.0 270 > th dose independent rect. 6 21
22 63.07 wind 9.0 270 < th dose dependent rect. 3 3
23 63.17 radiation 40.0 270 < th dose dependent rect. 3 3
32 63.44 precipitation 0.1 270 < th dose independent rect. 2 5
33 63.44 precipitation 0.1 270 < th dose dependent rect. 2 5
36 63.66 radiation 30.0 90 < th dose independent rect. 3 6
39 63.75 precipitation 0.1 30 < th dose independent rect. 4 5
40 63.75 precipitation 0.1 30 < th dose dependent rect. 4 5
41 63.76 wind 9.0 30 < th dose independent rect. 9 19
43 63.80 precipitation 0.1 270 < th dose independent rect. 4 1
44 63.80 precipitation 0.1 270 < th dose dependent rect. 4 1
46 63.82 temperature 10.0 30 > th dose independent rect. 4 5
48 63.82 temperature 30.0 30 < th dose independent rect. 4 5
49 63.82 humidity 50.0 30 > th dose independent rect. 4 5
51 63.82 atmosphere 995.0 30 > th dose independent rect. 4 5
52 63.82 atmosphere 1015.0 30 < th dose independent rect. 4 5
53 63.82 temperature 10.0 30 > th dose independent rect. 9 19
54 63.88 wind 9.0 270 < th dose independent rect. 7 19
58 63.97 atmosphere 995.0 30 > th dose independent rect. 9 19
60 64.00 radiation 1.0 270 < th dose dependent rect. 4 1
68 64.18 wind 9.0 270 < th dose dependent rect. 4 1
71 64.21 temperature 10.0 270 > th dose independent rect. 2 5
73 64.21 temperature 30.0 270 < th dose independent rect. 2 5
74 64.21 humidity 50.0 270 > th dose independent rect. 2 5
76 64.21 atmosphere 995.0 270 > th dose independent rect. 2 5
77 64.21 atmosphere 1015.0 270 < th dose independent rect. 2 5
81 64.21 temperature 10.0 270 > th dose independent rect. 7 19
84 64.23 atmosphere 995.0 270 > th dose independent rect. 6 21
86 64.25 temperature 10.0 270 > th dose independent rect. 4 1
88 64.25 temperature 30.0 270 < th dose independent rect. 4 1
89 64.25 humidity 50.0 270 > th dose independent rect. 4 1
92 64.25 atmosphere 995.0 270 > th dose independent rect. 4 1
93 64.25 atmosphere 1010.0 270 < th dose independent rect. 4 1
95 64.25 radiation 20.0 270 < th dose independent rect. 4 1
98 64.25 temperature 10.0 270 > th dose independent rect. 5 23
100 64.28 radiation 40.0 270 < th dose dependent rect. 4 1
109 64.33 temperature 10.0 270 > th dose dependent rect. 3 3
111 64.39 wind 9.0 270 < th dose dependent rect. 2 5
115 64.41 radiation 40.0 270 < th dose dependent rect. 2 5
119 64.45 radiation 1.0 270 < th dose independent rect. 4 1
122 64.46 wind 9.0 270 < th dose independent rect. 5 23
123 64.49 precipitation 0.1 270 < th dose independent rect. 6 21
124 64.49 precipitation 0.1 270 < th dose dependent rect. 6 21
156 64.64 temperature 10.0 30 > th dose dependent rect. 4 5
177 64.85 precipitation 0.1 30 < th dose independent rect. 9 19
178 64.85 precipitation 0.1 30 < th dose dependent rect. 9 19
235 65.22 precipitation 0.1 270 < th dose independent rect. 7 19
236 65.22 precipitation 0.1 270 < th dose dependent rect. 7 19
246 65.32 humidity 50.0 270 > th dose dependent rect. 3 3
269 65.64 humidity 50.0 270 > th dose dependent rect. 4 1
277 65.73 precipitation 0.1 90 < th dose independent rect. 8 7
280 65.73 temperature 10.0 270 > th dose dependent rect. 2 5
281 65.73 precipitation 0.1 90 < th dose dependent rect. 8 7
295 65.82 precipitation 0.1 10 < th dose independent rect. 15 18
296 65.82 precipitation 0.1 10 < th dose dependent rect. 15 18
299 65.85 atmosphere 995.0 90 > th dose independent rect. 8 7
305 65.89 temperature 10.0 90 > th dose independent rect. 8 7
306 65.89 atmosphere 1015.0 90 < th dose independent rect. 8 7
307 65.89 temperature 10.0 90 > th dose independent rect. 15 17
316 65.97 precipitation 0.1 90 < th dose independent rect. 15 17
317 65.97 precipitation 0.1 90 < th dose dependent rect. 15 17
319 66.00 wind 9.0 90 < th dose independent rect. 8 7
322 66.02 temperature 10.0 1440 > th dose independent rect. 5 5
325 66.02 atmosphere 995.0 1440 > th dose independent rect. 5 5
326 66.02 atmosphere 1015.0 1440 < th dose independent rect. 5 5
327 66.02 temperature 10.0 1440 > th dose independent rect. 10 19
347 66.07 radiation 40.0 90 < th dose independent rect. 15 17
349 66.07 temperature 10.0 270 > th dose dependent rect. 4 1
375 66.16 wind 1.0 270 > th dose independent rect. 3 3
401 66.27 radiation 1.0 10 > th dose independent rect. 9 6
410 66.31 atmosphere 1015.0 30 < th dose independent rect. 9 19
412 66.34 wind 9.0 90 < th dose independent rect. 15 17
413 66.37 temperature 10.0 10 > th dose independent rect. 9 6
415 66.37 atmosphere 995.0 10 > th dose independent rect. 9 6
416 66.37 atmosphere 1015.0 10 < th dose independent rect. 9 6
417 66.37 precipitation 0.1 10 < th dose independent rect. 9 6
418 66.37 temperature 10.0 10 > th dose independent rect. 15 18
420 66.37 precipitation 0.1 10 < th dose dependent rect. 9 6
430 66.46 wind 9.0 10 < th dose independent rect. 9 6
432 66.47 radiation 1.0 90 > th dose independent rect. 8 7
438 66.49 atmosphere 995.0 30 > th dose dependent rect. 4 5
440 66.50 wind 1.0 270 > th dose independent rect. 2 5
448 66.52 radiation 1.0 30 > th dose independent rect. 5 4
473 66.56 radiation 40.0 90 < th dose independent rect. 13 19
495 66.65 wind 1.0 90 > th dose independent rect. 8 7
517 66.70 precipitation 0.1 270 < th dose independent rect. 3 15
519 66.70 precipitation 0.1 270 < th dose dependent rect. 3 15
520 66.72 radiation 1.0 270 > th dose independent rect. 9 1
536 66.81 wind 7.0 270 < th dose independent rect. 9 1
539 66.81 wind 9.0 10 < th dose independent rect. 15 18
543 66.82 atmosphere 1000.0 270 > th dose dependent rect. 4 1
551 66.85 precipitation 0.1 270 < th dose independent rect. 9 1
552 66.85 temperature 10.0 1440 > th dose independent rect. 10 6
555 66.85 temperature 10.0 1440 > th dose independent rect. 16 18
558 66.85 precipitation 0.1 270 < th dose dependent rect. 9 1
568 66.91 humidity 50.0 270 > th dose independent rect. 9 1
574 66.93 temperature 15.0 270 > th dose independent rect. 9 1
576 66.93 atmosphere 995.0 270 > th dose independent rect. 18 9
579 66.94 atmosphere 995.0 270 > th dose independent rect. 9 1
580 66.94 atmosphere 1015.0 270 < th dose independent rect. 9 1
587 66.94 temperature 10.0 270 > th dose independent rect. 10 23
635 67.03 humidity 50.0 270 > th dose dependent rect. 2 5
639 67.05 radiation 10.0 270 < th dose dependent rect. 18 9
640 67.06 radiation 10.0 270 < th dose independent rect. 18 9
668 67.12 wind 9.0 270 < th dose independent rect. 18 9
702 67.17 temperature 10.0 270 > th dose independent rect. 18 9
703 67.17 humidity 50.0 270 > th dose independent rect. 18 9
707 67.17 temperature 10.0 270 > th dose independent rect. 3 15
708 67.17 atmosphere 1015.0 270 < th dose independent rect. 3 15
775 67.43 wind 9.0 270 < th dose dependent rect. 7 6
786 67.52 humidity 50.0 10 > th dose independent rect. 15 18
787 67.52 wind 9.0 270 < th dose dependent rect. 9 1
790 67.54 humidity 50.0 30 > th dose independent rect. 9 19
804 67.60 humidity 50.0 270 > th dose independent rect. 7 6
805 67.60 temperature 10.0 10 > th dose dependent rect. 9 5
813 67.65 atmosphere 995.0 90 > th dose independent rect. 15 17
815 67.66 humidity 90.0 10 < th dose independent rect. 9 6
817 67.66 temperature 10.0 270 > th dose dependent rect. 9 1
819 67.66 humidity 50.0 270 > th dose dependent rect. 18 8
824 67.70 atmosphere 1015.0 270 < th dose dependent rect. 4 1
827 67.71 temperature 30.0 270 < th dose dependent rect. 4 1
828 67.71 atmosphere 1015.0 30 < th dose dependent rect. 4 5
843 67.74 atmosphere 1015.0 270 < th dose dependent rect. 3 3
847 67.75 wind 9.0 270 < th dose dependent rect. 7 19
852 67.78 wind 1.0 270 > th dose independent rect. 9 1
854 67.79 radiation 1.0 270 < th dose independent rect. 3 9
866 67.84 precipitation 0.1 270 < th dose independent rect. 10 23
869 67.84 precipitation 0.1 270 < th dose dependent rect. 10 23
889 67.93 humidity 90.0 90 < th dose independent rect. 8 7
928 68.01 atmosphere 995.0 10 > th dose independent rect. 15 18
932 68.04 wind 9.0 270 < th dose independent rect. 3 15