Os03g0596600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0596600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 279.63 | 0.786 | 4.43 | -1.51 | 0.179 | 3.49 | 0.569 | -3.75 | 1.13 | 0.257 | 21.97 | 916 | 15.7 | 15.9 |
| 286.8 | 0.789 | 4.34 | -0.639 | 0.19 | 3.21 | 0.245 | -- | 1.37 | 24 | 21.62 | 930 | 15.5 | 15.6 |
| 280.75 | 0.78 | 4.44 | -1.47 | 0.193 | 3.46 | -- | -3.47 | 1.15 | 1.84 | 22.07 | 917 | 15.6 | 16.1 |
| 286.83 | 0.789 | 4.33 | -0.669 | 0.174 | 3.21 | -- | -- | 1.39 | 2.35 | 21.6 | 939 | 15.2 | 16 |
| 281.94 | 0.782 | 4.42 | -1.41 | -- | 3.57 | -- | -3.3 | 1.16 | -- | 21.99 | 910 | 15.5 | 15.9 |
| 527.46 | 1.08 | 4.19 | 0.0608 | 1.25 | -- | 0.471 | -- | 1.99 | 3.71 | -- | -- | -- | -- |
| 528.12 | 1.08 | 4.19 | 0.0536 | 1.26 | -- | -- | -- | 1.98 | 3.74 | -- | -- | -- | -- |
| 287.94 | 0.79 | 4.34 | -0.666 | -- | 3.3 | -- | -- | 1.4 | -- | 21.6 | 927 | 15.2 | 15.8 |
| 297.51 | 0.803 | 4.32 | -- | 0.222 | 3.03 | -- | -- | 1.47 | 2.05 | 21.94 | 926 | 15.6 | 15.7 |
| 615.47 | 1.16 | 4.19 | 0.106 | -- | -- | -- | -- | 2.02 | -- | -- | -- | -- | -- |
| 528.2 | 1.08 | 4.19 | -- | 1.26 | -- | -- | -- | 1.98 | 3.74 | -- | -- | -- | -- |
| 299.08 | 0.805 | 4.32 | -- | -- | 3.19 | -- | -- | 1.48 | -- | 21.83 | 912 | 15.4 | 15.6 |
| 615.77 | 1.16 | 4.2 | -- | -- | -- | -- | -- | 2.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 3 | 299.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 299.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 7 | 300.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 9 | 301.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 11 | 301.80 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 19 | 302.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 30 | 302.98 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 36 | 303.92 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 38 | 304.15 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 39 | 304.39 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 40 | 304.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 44 | 304.75 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 46 | 304.86 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 47 | 304.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 48 | 304.87 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 50 | 304.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 68 | 305.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 75 | 305.24 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 83 | 305.55 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 134 | 307.10 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 161 | 307.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 169 | 307.97 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 201 | 308.37 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 7 |
| 207 | 308.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 263 | 309.17 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 277 | 309.33 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 282 | 309.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 300 | 309.55 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 303 | 309.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 307 | 309.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 342 | 309.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 349 | 309.88 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 7 |
| 377 | 310.04 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 402 | 310.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 452 | 310.53 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 454 | 310.55 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 468 | 310.59 | wind | 5 | 43200 | > th | dose dependent | sin | 1 | NA |
| 470 | 310.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 579 | 311.05 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 587 | 311.07 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 674 | 311.45 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 722 | 311.69 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 963 | 312.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |