Os03g0596200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0596200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.3 | 0.705 | 4.91 | 0.0222 | 0.117 | 1.33 | 1.83 | -0.716 | 0.475 | 5.99 | 24.76 | 4130 | -- | -- |
| 225.66 | 0.7 | 4.94 | -0.186 | 0.0969 | 1.29 | 1.88 | -- | 0.421 | 5.87 | 24.74 | 4047 | -- | -- |
| 232.85 | 0.711 | 4.9 | 0.0919 | 0.169 | 1.32 | -- | -0.917 | 0.477 | 8.67 | 24.75 | 4154 | -- | -- |
| 233.41 | 0.712 | 4.94 | -0.164 | 0.167 | 1.27 | -- | -- | 0.407 | 8.62 | 24.73 | 4130 | -- | -- |
| 234.28 | 0.713 | 4.91 | 0.0362 | -- | 1.32 | -- | -0.721 | 0.474 | -- | 24.71 | 4045 | -- | -- |
| 268.84 | 0.769 | 5 | -0.686 | 0.0829 | -- | 1.84 | -- | 0.117 | 6.14 | -- | -- | -- | -- |
| 273.98 | 0.775 | 5 | -0.66 | 0.243 | -- | -- | -- | 0.113 | 10.7 | -- | -- | -- | -- |
| 234.64 | 0.713 | 4.94 | -0.166 | -- | 1.28 | -- | -- | 0.418 | -- | 24.75 | 4022 | -- | -- |
| 234.05 | 0.713 | 4.93 | -- | 0.163 | 1.33 | -- | -- | 0.434 | 8.51 | 24.72 | 4142 | -- | -- |
| 277.61 | 0.779 | 5.01 | -0.664 | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
| 285.45 | 0.79 | 4.99 | -- | 0.248 | -- | -- | -- | 0.187 | 10.9 | -- | -- | -- | -- |
| 235.27 | 0.714 | 4.93 | -- | -- | 1.34 | -- | -- | 0.447 | -- | 24.79 | 4022 | -- | -- |
| 289.26 | 0.794 | 4.99 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 2 | 221.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 14 | 221.96 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 18 | 222.04 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 23 | 222.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 36 | 222.47 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 44 | 222.65 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 47 | 222.69 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 66 | 222.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 75 | 223.00 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 107 | 223.44 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 14 |
| 129 | 223.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 18 |
| 189 | 224.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 191 | 224.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 194 | 224.39 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 196 | 224.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 220 | 224.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 225 | 224.82 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 228 | 224.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 276 | 225.06 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 283 | 225.08 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 304 | 225.20 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 306 | 225.21 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 310 | 225.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 361 | 225.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 381 | 225.49 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 412 | 225.65 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 436 | 225.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 569 | 226.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 11 |
| 576 | 226.11 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 590 | 226.15 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 624 | 226.25 | temperature | 25 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 967 | 227.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 977 | 227.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 7 |