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Os03g0595300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.2 (0.0211) R2 : 0.486
β1 : -1.45 (0.0773) R2dD : 0.412 R2D : 0.258
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.554 (0.0451) R2dN8 : 0.228 R2N8 : 0.0741
σ : 0.396
deviance : 71.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.08 0.367 14.2 -1.36 0.205 -0.121 0.133 -2.69 -0.587 0.783 0.1201 1602 -- --
60.33 0.362 14.2 -1.07 0.227 -0.652 0.233 -- -0.603 0.586 0.5044 28007 -- --
61.14 0.364 14.2 -1.34 0.204 -0.25 -- -2.21 -0.589 0.757 -0.004512 1602 -- --
60.12 0.361 14.2 -1.01 0.206 -0.698 -- -- -0.604 0.995 0.5254 27647 -- --
63.77 0.372 14.2 -1.34 -- -0.232 -- -2.28 -0.585 -- -0.03828 1601 -- --
69.35 0.39 14.2 -1.46 0.203 -- 0.0839 -- -0.558 1.15 -- -- -- --
69.38 0.39 14.2 -1.46 0.203 -- -- -- -0.558 1.14 -- -- -- --
62.28 0.368 14.2 -1 -- -0.716 -- -- -0.626 -- 0.5 27324 -- --
76.07 0.406 14.2 -- 0.167 -0.976 -- -- -0.627 0.679 0.9044 47520 -- --
71.94 0.396 14.2 -1.45 -- -- -- -- -0.554 -- -- -- -- --
125.5 0.524 14.2 -- 0.179 -- -- -- -0.396 0.813 -- -- -- --
77.81 0.411 14.2 -- -- -0.981 -- -- -0.625 -- 0.8923 47520 -- --
127.51 0.527 14.2 -- -- -- -- -- -0.393 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.71 humidity 8e+01 43200 > th dose independent rect. 6 1
2 58.27 humidity 8e+01 43200 < th dose independent rect. 6 1
4 58.77 precipitation 1e-01 14400 > th dose dependent rect. 12 4
5 58.81 wind 1e+00 14400 < th dose independent rect. 3 2
7 58.89 atmosphere 1e+03 90 > th dose independent rect. 11 21
11 59.03 precipitation 1e-01 14400 < th dose independent rect. 13 3
12 59.03 precipitation 1e-01 14400 < th dose dependent rect. 13 3
14 59.04 precipitation 1e-01 14400 > th dose independent rect. 13 3
17 59.07 radiation 1e+00 1440 < th dose dependent rect. 7 10
18 59.08 atmosphere 1e+03 10 > th dose independent rect. 12 20
27 59.27 wind 1e+00 14400 > th dose independent rect. 4 1
29 59.29 wind 1e+00 14400 > th dose independent rect. 2 3
40 59.40 wind 1e+00 14400 < th dose dependent rect. 2 3
44 59.45 precipitation 1e-01 14400 > th dose dependent rect. 9 8
63 59.61 humidity 8e+01 14400 > th dose independent rect. 13 5
65 59.64 humidity 8e+01 14400 > th dose independent rect. 15 2
74 59.68 wind 1e+00 43200 < th dose independent rect. 1 7
76 59.69 wind 5e+00 43200 < th dose dependent rect. 7 1
88 59.73 wind 1e+00 90 < th dose dependent rect. 24 1
92 59.76 wind 3e+00 43200 < th dose independent rect. 7 1
95 59.79 humidity 8e+01 14400 > th dose independent rect. 13 11
117 59.89 wind 3e+00 43200 < th dose dependent rect. 2 6
118 59.90 precipitation 1e-01 14400 < th dose independent rect. 9 8
120 59.90 precipitation 1e-01 14400 < th dose dependent rect. 9 8
132 59.96 wind 1e+00 43200 > th dose dependent rect. 7 1
138 59.99 precipitation 1e-01 14400 > th dose independent rect. 9 8
142 60.01 wind 1e+00 43200 > th dose independent rect. 1 8
149 60.04 wind 3e+00 43200 > th dose independent rect. 7 1
153 60.05 precipitation 1e-01 4320 > th dose dependent rect. 22 19
162 60.08 precipitation 1e-01 4320 > th dose dependent rect. 2 15
164 60.10 humidity 8e+01 14400 < th dose independent rect. 13 10
165 60.10 humidity 7e+01 14400 > th dose dependent rect. 13 1
167 60.11 precipitation 1e-01 720 > th dose independent rect. 23 18
180 60.18 humidity 8e+01 14400 > th dose independent sin 18 NA
181 60.18 precipitation 1e-01 14400 < th dose independent rect. 19 1
182 60.18 precipitation 1e-01 14400 > th dose independent rect. 12 8
183 60.18 precipitation 1e-01 14400 < th dose dependent rect. 19 1
189 60.20 precipitation 1e-01 14400 > th dose independent rect. 19 1
197 60.21 precipitation 1e-01 14400 < th dose independent rect. 12 8
202 60.21 precipitation 1e-01 14400 < th dose dependent rect. 12 8
203 60.22 precipitation 1e-01 14400 > th dose independent rect. 17 1
206 60.22 precipitation 1e-01 43200 > th dose dependent rect. 19 1
211 60.24 precipitation 1e-01 14400 < th dose independent rect. 17 1
212 60.24 precipitation 1e-01 14400 < th dose dependent rect. 17 1
214 60.25 humidity 8e+01 14400 < th dose independent rect. 16 1
225 60.26 precipitation 1e-01 14400 < th dose independent rect. 9 11
226 60.26 precipitation 1e-01 14400 < th dose dependent rect. 9 11
229 60.27 precipitation 1e-01 14400 > th dose independent rect. 9 11
236 60.29 humidity 8e+01 14400 < th dose independent rect. 14 1
239 60.29 precipitation 1e-01 14400 > th dose dependent rect. 2 18
245 60.31 humidity 8e+01 14400 < th dose independent rect. 13 5
248 60.32 humidity 8e+01 14400 < th dose independent rect. 14 3
254 60.32 precipitation 1e-01 14400 > th dose independent rect. 3 17
255 60.32 precipitation 1e-01 1440 < th dose independent rect. 23 18
258 60.32 precipitation 1e-01 1440 < th dose dependent rect. 23 18
266 60.34 precipitation 1e-01 14400 > th dose independent rect. 7 13
271 60.35 precipitation 1e-01 14400 < th dose independent rect. 7 13
273 60.35 precipitation 1e-01 14400 < th dose independent rect. 3 17
275 60.35 precipitation 1e-01 14400 < th dose dependent rect. 7 13
276 60.35 precipitation 1e-01 14400 < th dose dependent rect. 3 17
282 60.37 humidity 8e+01 1440 < th dose independent rect. 9 6
287 60.37 precipitation 1e-01 14400 > th dose dependent rect. 22 22
309 60.40 precipitation 1e-01 14400 > th dose dependent sin 2 NA
341 60.45 precipitation 1e-01 43200 > th dose dependent rect. 16 4
345 60.46 precipitation 1e-01 1440 < th dose independent rect. 19 6
349 60.46 precipitation 1e-01 1440 < th dose dependent rect. 19 6
370 60.50 humidity 8e+01 14400 < th dose independent sin 18 NA
373 60.50 precipitation 1e-01 1440 > th dose dependent rect. 19 22
381 60.52 wind 1e+00 43200 < th dose independent rect. 3 7
382 60.52 humidity 8e+01 1440 > th dose independent rect. 9 7
414 60.57 humidity 8e+01 1440 > th dose independent rect. 9 12
428 60.59 humidity 8e+01 1440 > th dose independent rect. 9 15
433 60.60 precipitation 1e-01 14400 > th dose independent sin 0 NA
434 60.60 precipitation 1e-01 14400 < th dose independent sin 0 NA
436 60.60 precipitation 1e-01 14400 < th dose dependent sin 0 NA
452 60.63 precipitation 1e-01 1440 > th dose independent rect. 23 21
462 60.65 precipitation 1e-01 1440 > th dose independent sin 2 NA
463 60.65 precipitation 1e-01 1440 < th dose independent sin 2 NA
464 60.65 wind 1e+00 90 < th dose independent rect. 24 1
473 60.65 precipitation 1e-01 1440 < th dose independent rect. 23 21
474 60.65 precipitation 1e-01 1440 < th dose dependent sin 2 NA
477 60.65 precipitation 1e-01 1440 < th dose dependent rect. 23 21
518 60.69 humidity 8e+01 1440 < th dose independent rect. 9 12
589 60.74 precipitation 1e-01 14400 > th dose dependent rect. 13 7
617 60.77 humidity 6e+01 14400 > th dose dependent rect. 16 1
631 60.78 precipitation 1e-01 14400 > th dose dependent rect. 9 11
642 60.79 precipitation 1e-01 14400 > th dose dependent rect. 7 13
664 60.81 precipitation 1e-01 14400 > th dose independent rect. 22 22
665 60.81 precipitation 1e-01 14400 < th dose independent rect. 22 22
672 60.81 precipitation 1e-01 14400 < th dose dependent rect. 22 22
676 60.82 precipitation 1e-01 1440 < th dose independent rect. 18 10
684 60.82 precipitation 1e-01 1440 > th dose dependent rect. 19 9
685 60.82 precipitation 1e-01 1440 < th dose dependent rect. 18 10
688 60.83 humidity 8e+01 1440 > th dose independent sin 22 NA
717 60.85 precipitation 1e-01 1440 > th dose dependent rect. 18 16
727 60.86 humidity 8e+01 14400 < th dose dependent rect. 19 2
730 60.86 humidity 7e+01 90 > th dose dependent rect. 23 9
750 60.88 wind 5e+00 43200 < th dose dependent rect. 5 4
760 60.89 wind 1e+00 43200 > th dose independent rect. 3 7
790 60.92 precipitation 1e-01 1440 < th dose independent rect. 16 3
800 60.92 precipitation 1e-01 1440 > th dose independent rect. 18 23
801 60.92 precipitation 1e-01 1440 < th dose independent rect. 18 23
804 60.92 precipitation 1e-01 1440 < th dose dependent rect. 16 3
806 60.92 humidity 7e+01 14400 > th dose dependent rect. 13 8
814 60.92 precipitation 1e-01 1440 < th dose dependent rect. 18 23
950 61.01 humidity 8e+01 1440 < th dose independent sin 22 NA
969 61.02 precipitation 1e-01 1440 > th dose independent rect. 18 10
998 61.03 humidity 9e+01 14400 < th dose dependent rect. 16 1