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Os03g0594900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0322) R2 : 0.919
β1 : 0.0481 (0.124) R2dD : 1.69e-05 R2D : -0.00203
β2 : 6.58 (0.097) R2dC : 1.17 R2C : 0.724
β3 : -2.95 (0.128) R2dE : 0.139 R2E : -0.27
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.41 (0.338) R2dD*E : 0.0345 R2D*E : 0.0394
γ1 : -0.172 (0.07) R2dN8 : 0.00157 R2N8 : -0.0101
σ : 0.596
deviance : 163.69
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C
peak time of C : 7.75
E
wheather : temperature
threshold : 29.9
memory length : 780
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.47
open length of G : 4.55

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
163.22 0.6 11.3 0.0693 6.6 -2.97 0.623 4.06 -0.161 7.76 30.17 777 2.5 4.6
193.78 0.648 11.2 0.403 6.51 -3.36 3.62 -- -0.0748 8.04 31.72 768 3.25 4.54
163.69 0.596 11.3 0.0481 6.58 -2.95 -- 4.41 -0.172 7.75 29.9 780 2.47 4.55
224.69 0.698 11.3 0.455 6.47 -3.13 -- -- -0.132 7.76 28.89 793 2.52 4.37
1145.63 1.58 11.5 0.0177 -- -7.26 -- 2.46 -0.871 -- 58.23 1163 6.07 5.38
291.76 0.801 11.2 0.871 5.65 -- 2.36 -- 0.251 6.79 -- -- -- --
305.19 0.818 11.2 0.906 5.67 -- -- -- 0.243 6.71 -- -- -- --
355.41 0.878 11.4 0.148 -- -7.79 -- -- -0.175 -- 66.62 641 8.42 9.57
229.95 0.706 11.2 -- 6.56 -3.19 -- -- -0.18 7.69 28.36 801 2.25 4.42
1982.8 2.08 11.3 1.04 -- -- -- -- 0.355 -- -- -- -- --
326.83 0.846 11.2 -- 5.68 -- -- -- 0.142 6.7 -- -- -- --
319.9 0.833 11.3 -- -- -5.87 -- -- 0.15 -- 145.8 714 8.78 8
2011.13 2.09 11.3 -- -- -- -- -- 0.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 168.76 temperature 30 720 < th dose dependent rect. 3 5
3 169.92 temperature 30 720 < th dose dependent rect. 5 2
28 177.63 temperature 20 720 < th dose independent rect. 4 2
106 193.93 temperature 30 720 < th dose dependent sin 7 NA
113 194.54 temperature 25 720 < th dose independent rect. 7 1
125 195.15 temperature 10 720 > th dose dependent rect. 1 6
132 196.26 temperature 10 720 > th dose dependent rect. 1 8
158 199.19 temperature 25 270 < th dose independent rect. 6 9
159 199.24 temperature 10 720 > th dose dependent rect. 1 10
229 204.31 temperature 25 270 < th dose independent rect. 1 13
235 204.72 temperature 25 270 < th dose independent sin 4 NA
252 205.50 temperature 30 270 < th dose dependent rect. 5 11
271 206.59 temperature 30 10 < th dose independent rect. 11 8
298 207.67 temperature 30 10 < th dose independent rect. 9 10
346 209.89 temperature 20 720 > th dose independent rect. 3 9
356 210.26 temperature 10 270 > th dose dependent sin 4 NA
369 210.64 temperature 10 10 > th dose dependent sin 1 NA
373 210.80 radiation 20 270 < th dose independent rect. 16 17
390 211.36 temperature 25 270 < th dose independent rect. 16 7
398 211.49 temperature 25 270 < th dose independent rect. 16 14
404 211.62 humidity 60 90 > th dose independent rect. 17 18
408 211.68 temperature 10 90 > th dose dependent sin 2 NA
414 211.79 temperature 25 720 < th dose independent rect. 22 14
429 212.21 temperature 30 10 < th dose dependent rect. 7 10
441 212.59 radiation 30 10 < th dose independent rect. 19 16
498 214.14 humidity 70 270 > th dose independent rect. 16 16
505 214.42 temperature 30 10 < th dose dependent rect. 9 8
509 214.58 temperature 30 10 < th dose independent sin 22 NA
518 214.70 radiation 40 270 < th dose dependent rect. 16 17
571 215.61 radiation 10 720 < th dose independent rect. 18 13
576 215.63 radiation 40 270 < th dose dependent rect. 16 19
611 216.38 atmosphere 1000 270 > th dose independent rect. 16 16
624 216.59 atmosphere 1000 30 > th dose independent rect. 19 16
646 216.86 temperature 10 720 > th dose dependent sin 7 NA
657 217.05 radiation 10 720 < th dose independent rect. 23 7
685 217.37 radiation 40 10 < th dose dependent rect. 19 17
704 217.52 temperature 30 30 < th dose dependent rect. 17 16
707 217.57 temperature 30 270 < th dose dependent rect. 16 6
711 217.60 temperature 30 90 < th dose dependent rect. 17 14
732 217.89 humidity 50 270 > th dose independent rect. 9 7
734 217.90 radiation 40 720 < th dose independent rect. 1 8
744 218.01 temperature 25 90 < th dose independent sin 14 NA
751 218.05 radiation 30 10 < th dose independent rect. 19 14
755 218.07 temperature 30 720 < th dose independent rect. 8 16
811 218.57 temperature 30 720 < th dose independent rect. 8 21
818 218.61 temperature 30 720 < th dose independent rect. 8 14
868 219.07 temperature 30 720 < th dose independent rect. 10 10
890 219.21 temperature 30 10 < th dose independent rect. 24 17
894 219.22 temperature 25 720 < th dose independent rect. 17 2
897 219.24 temperature 20 270 > th dose independent sin 1 NA
913 219.34 radiation 40 10 < th dose dependent rect. 19 14
917 219.39 humidity 60 90 > th dose independent sin 8 NA
927 219.47 atmosphere 995 90 > th dose dependent rect. 17 16
944 219.60 temperature 30 720 < th dose independent sin 21 NA
949 219.63 radiation 40 10 < th dose independent sin 10 NA