FiT-DB / Search/ Help/ Sample detail

Os03g0594400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Monosaccharide transporter 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0248) R2 : 0.839
β1 : 2.49 (0.0907) R2dD : 0.276 R2D : 0.128
β2 : 1.27 (0.0661) R2dC : 0.142 R2C : 0.141
β3 : 1.23 (0.0599) R2dE : 0.162 R2E : 0.159
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -2.42 (0.226) R2dD*E : 0.0403 R2D*E : -0.0135
γ1 : 1.41 (0.0528) R2dN8 : 0.337 R2N8 : 0.128
σ : 0.462
deviance : 98.6
__
_____
C
peak time of C : 19.5
E
wheather : radiation
threshold : 28.51
memory length : 63
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.92 0.463 9.37 2.5 1.28 1.24 0.87 -2.71 1.41 19.6 29.05 67 -- --
118.02 0.506 9.41 2.47 1.46 1.09 -1.29 -- 1.35 20.9 58.09 43 -- --
98.6 0.462 9.37 2.49 1.27 1.23 -- -2.42 1.41 19.5 28.51 63 -- --
120.14 0.51 9.38 2.5 1.34 1.5 -- -- 1.38 20.2 70.94 49 -- --
157.8 0.585 9.37 2.51 -- 1.44 -- -2.23 1.37 -- 16.6 8 -- --
137.05 0.549 9.41 2.44 1.86 -- -1.53 -- 1.33 21.9 -- -- -- --
145.83 0.566 9.4 2.5 1.88 -- -- -- 1.33 21.8 -- -- -- --
179.25 0.624 9.35 2.51 -- 1.4 -- -- 1.33 -- 15.13 6 -- --
284.8 0.786 9.44 -- 1.33 1.5 -- -- 1.1 20.3 125.4 52 -- --
355.6 0.881 9.35 2.52 -- -- -- -- 1.33 -- -- -- -- --
310.88 0.825 9.47 -- 1.88 -- -- -- 1.05 21.9 -- -- -- --
339.82 0.859 9.41 -- -- 1.38 -- -- 1.06 -- 10 3 -- --
523.17 1.07 9.42 -- -- -- -- -- 1.05 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.77 radiation 30 90 < th dose dependent rect. 11 23
5 98.76 radiation 30 90 < th dose dependent rect. 21 23
6 99.09 radiation 10 90 > th dose independent rect. 7 9
22 99.49 radiation 10 90 > th dose independent sin 1 NA
24 99.73 radiation 30 30 < th dose dependent rect. 13 23
25 99.78 radiation 30 90 < th dose dependent no NA NA
26 99.81 radiation 30 90 < th dose dependent rect. 15 23
31 100.06 radiation 20 90 < th dose independent rect. 11 23
34 100.21 radiation 30 30 < th dose dependent rect. 23 23
64 101.54 radiation 1 90 > th dose dependent rect. 7 9
67 101.61 radiation 30 90 < th dose dependent sin 4 NA
79 102.10 radiation 1 90 > th dose dependent rect. 4 12
90 102.11 radiation 1 30 > th dose dependent rect. 7 23
96 102.23 radiation 20 90 < th dose independent rect. 21 23
101 102.29 humidity 90 10 < th dose dependent rect. 7 9
122 102.45 radiation 20 90 < th dose independent rect. 15 23
163 102.86 humidity 90 90 < th dose dependent rect. 20 20
177 102.94 radiation 1 90 > th dose dependent no NA NA
223 102.96 radiation 1 90 > th dose dependent sin 2 NA
236 102.99 radiation 20 90 < th dose independent sin 5 NA
282 103.39 radiation 10 90 > th dose independent rect. 9 23
306 103.70 radiation 20 90 < th dose independent no NA NA
312 103.92 radiation 10 90 > th dose independent no NA NA
397 104.07 radiation 1 90 > th dose dependent rect. 15 23
403 104.24 radiation 20 30 < th dose independent rect. 23 23
413 104.40 humidity 90 10 < th dose dependent rect. 22 18
440 104.54 humidity 90 90 < th dose dependent rect. 3 13
445 104.58 humidity 90 90 < th dose dependent rect. 5 11
451 104.66 radiation 20 90 < th dose independent rect. 23 21
540 104.80 humidity 80 90 < th dose independent rect. 23 17
561 104.87 humidity 90 10 < th dose dependent rect. 3 13
566 104.94 humidity 90 10 < th dose dependent rect. 5 11
595 105.06 humidity 90 90 < th dose dependent rect. 24 16
599 105.09 radiation 30 30 < th dose dependent rect. 6 14
603 105.11 radiation 30 90 < th dose dependent rect. 23 21
604 105.11 radiation 30 30 < th dose dependent rect. 1 23
611 105.17 humidity 90 10 < th dose dependent rect. 24 16
639 105.30 humidity 80 90 < th dose independent rect. 5 11
647 105.35 radiation 20 90 < th dose dependent rect. 5 23
664 105.39 radiation 10 10 > th dose independent rect. 9 23
683 105.57 humidity 50 90 > th dose dependent sin 6 NA
695 105.71 temperature 20 720 < th dose independent rect. 2 5
723 105.93 radiation 40 270 < th dose independent rect. 10 21
741 105.97 radiation 1 90 > th dose dependent rect. 13 23
753 106.05 radiation 20 90 < th dose dependent rect. 3 23
871 106.36 temperature 20 720 > th dose independent rect. 24 7
881 106.43 humidity 90 10 < th dose dependent rect. 9 7
907 106.62 radiation 30 90 < th dose dependent rect. 15 20
930 106.74 temperature 20 720 < th dose independent rect. 5 2
939 106.83 radiation 30 90 < th dose dependent rect. 15 18
940 106.84 radiation 10 10 > th dose independent sin 23 NA