Os03g0593100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0593100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.83 | 0.583 | 8.37 | -0.109 | 0.57 | -2.61 | -1.01 | -3.46 | -0.773 | 8.45 | 11 | 88 | 15.2 | 13.1 |
| 160 | 0.589 | 8.34 | 0.11 | 0.589 | -2.62 | 0.787 | -- | -0.712 | 8.49 | 10.89 | 81 | 15.2 | 13.1 |
| 154.64 | 0.579 | 8.36 | -0.0839 | 0.551 | -2.63 | -- | -2.32 | -0.786 | 7.85 | 10.08 | 85 | 15.2 | 13.1 |
| 161.67 | 0.592 | 8.33 | 0.119 | 0.43 | -2.82 | -- | -- | -0.696 | 6.44 | 8.704 | 80 | 15.3 | 13.2 |
| 160.2 | 0.589 | 8.38 | 0.0489 | -- | -2.96 | -- | -1.77 | -0.736 | -- | 8.497 | 94 | 15 | 13.1 |
| 246.84 | 0.737 | 8.31 | -0.163 | 2.46 | -- | 1.41 | -- | -0.839 | 9.25 | -- | -- | -- | -- |
| 253.91 | 0.746 | 8.31 | -0.113 | 2.46 | -- | -- | -- | -0.837 | 9.25 | -- | -- | -- | -- |
| 162.04 | 0.593 | 8.35 | 0.148 | -- | -3.12 | -- | -- | -0.665 | -- | 8.778 | 132 | 14.6 | 13.2 |
| 161.96 | 0.593 | 8.34 | -- | 0.417 | -2.82 | -- | -- | -0.73 | 5.92 | 7.66 | 71 | 15.4 | 13.1 |
| 604.91 | 1.15 | 8.38 | -0.123 | -- | -- | -- | -- | -0.826 | -- | -- | -- | -- | -- |
| 254.24 | 0.746 | 8.31 | -- | 2.46 | -- | -- | -- | -0.825 | 9.25 | -- | -- | -- | -- |
| 162.58 | 0.594 | 8.35 | -- | -- | -3.07 | -- | -- | -0.687 | -- | 7.846 | 136 | 14.5 | 13.2 |
| 605.31 | 1.15 | 8.37 | -- | -- | -- | -- | -- | -0.812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.70 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 5 | 165.93 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 7 | 166.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 38 | 176.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 43 | 178.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 13 |
| 85 | 183.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 86 | 183.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 87 | 183.99 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 88 | 183.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 11 |
| 89 | 183.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 13 |
| 90 | 183.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 95 | 184.21 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 96 | 184.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 100 | 184.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 111 | 184.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 122 | 185.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 13 |
| 123 | 185.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 13 |
| 124 | 185.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 127 | 185.67 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 130 | 185.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 139 | 186.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 143 | 186.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 3 |
| 157 | 187.47 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 162 | 187.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 170 | 188.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 175 | 188.17 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 182 | 188.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 184 | 188.48 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 185 | 188.49 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 13 |
| 192 | 188.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 193 | 188.89 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 197 | 189.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 210 | 189.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 220 | 189.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 224 | 189.49 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 229 | 189.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 242 | 189.81 | temperature | 15.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 256 | 189.97 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 258 | 190.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 260 | 190.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 4 |
| 261 | 190.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 264 | 190.15 | radiation | 10.0 | 720 | > th | dose independent | rect. | 16 | 2 |
| 280 | 190.20 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 288 | 190.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 14 |
| 291 | 190.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 292 | 190.27 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 13 |
| 293 | 190.28 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 297 | 190.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 22 |
| 300 | 190.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 319 | 190.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 320 | 190.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 321 | 190.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 322 | 190.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 328 | 190.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 22 |
| 329 | 190.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 334 | 190.53 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 341 | 190.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 348 | 190.67 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 363 | 190.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 364 | 190.74 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 365 | 190.74 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 4 |
| 376 | 190.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 378 | 190.89 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 389 | 191.03 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 390 | 191.03 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 407 | 191.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 408 | 191.30 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 409 | 191.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 2 |
| 410 | 191.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 412 | 191.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 416 | 191.35 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 433 | 191.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 434 | 191.46 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 435 | 191.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 450 | 191.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 469 | 191.58 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 472 | 191.58 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 507 | 191.83 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 515 | 191.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 5 |
| 521 | 191.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 19 |
| 524 | 191.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 528 | 191.91 | wind | 3.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 539 | 191.96 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 541 | 191.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 18 |
| 569 | 192.05 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 572 | 192.06 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 14 |
| 581 | 192.08 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 14 |
| 583 | 192.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 20 |
| 598 | 192.12 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 609 | 192.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 5 |
| 629 | 192.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 652 | 192.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 19 |
| 661 | 192.26 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 662 | 192.27 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 14 |
| 673 | 192.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 710 | 192.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 772 | 192.48 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 788 | 192.52 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 19 |
| 791 | 192.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 797 | 192.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 21 |
| 808 | 192.54 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 843 | 192.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 5 |
| 886 | 192.71 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 906 | 192.87 | temperature | 30.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 952 | 193.07 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 953 | 193.07 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 14 |
| 961 | 193.09 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 11 |